Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0605 ATGGCGTCTGAGAGCGCTTCTCGATCGAGTTCCGCTGCCGATACATACATTGGGAGTTTGATTAGCTTGACATCAAAGATGCGATCTTTTGGGACTGAAGGAAGGAAAAAGGATGGCCCACAAATTCCTCCAGGTGACAAGGTTTATGAGTATATACTTTTCCGTGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTCCAGCCTACTCCACAAGTCAACAATGACCCTGCTATTATTCAGTCTCACTTTCCTCACCCAGTGGGCACATCTACAAGTTTGCCCCCTGCTGTAAGTGGGCCTTTGACTGATCTTAGTTCTCACAATCAGCTTGGACTGCCTGGGTCAAGTTTTCAAGGGCCCTTGCCTTTGTATCAACCTGGAGGGAACATAGGATCGTGGGGAGCTTCTCCACCTGCTCCAAATGCAAATGGTGGAAGGCTTGCTATGCCACCACCAATGTATTGGCAAGGATATTATGGTGCCCCCAATGGGCTTCCTCAATTACACCAACAATCTTTGCTTCAAACGCCACCTGGTTTATCAATGCCTTCATCTATGCAGCAGCCAATGCATTATCCCAATTTCACTCCCTCTTTACCTACTGTATCTTCTAATTTGCCAGAATTACCATCATCTTTGCTGCCTGTGAGTGCTAGTGCCCACAGTGTAACATCTGCTTCCTTGCCTCCAGCACCTTCTGCTCTGCCTCCTGCTCCATCAGCTTTGCCTCCTGCACCTTCTGCTCTATCTCCTGCATCTTCTGCTTTATCTCCCAAGCCTACTGCAACGCTTGCTTCTGAAATTTTGCCAGTATCGGTAATAAATAAGGCTCCCAATGTTTCAACTTCAGCAGCCATGTTAGCTTCTAACTTACCATCACTGACCAATTCTGGTCCAGATATAAATGCTAGAGTGCCACCCATCTCCAGCAAACTGCATGCAATTTCAGGCTCAAGCCTGCCCTATCAAACTGTATCCCAGTTGTCTCCTACAGTTGTTGGATCATCAACTTCTGTCCATACAGAAACTTCATCTCCTTCTCTGGTAACCCCAGGTCAATTATTGCAGCCTGGACCAGCTATAGTTTCTTCAGCTCAGCCTTCACAAGCAACTCATAAGGATGTTGAAGTGGTACAGGTATCTTCAACATCATCTCCTGAGTCATCTGTGCCAGCTTCTGCTGAAACTCAACCACCAATACTGCCATTGCCAGTAACTTCACAGCCCAGTTACAGGCCCGGTGGAGCTCCTATCCAAAGTCATCATCATGGCTATAATAACTATTATAGAGGACGTGGAAGAGGAAGAGGAACTGGGGGTTTGCGCCCAGTCACAAAATTCACCGAAGATTTTGATTTCACAGCAATGAATGAGAAGTTCAAAAAGGATGAAGTTTGGGGTAATCTTGGTAAAAGTAAGTCTCATTCAAAAGATGGGGAAGAAAATTCCTTTGATGAAGATTACCAAGATGAAGACAATGATGATGTATCAAACATTGATGTTAAGCCTATTTATAACAAGGATGACTTCTTTGACTCGCTCTCGTCCAATGTGCATGATAATGCTTCACAAAATGGAAGGACTAGATACTCTGAACAAATCAAGATCGACACTGAGACTTTTGGTGATTTTGTGAGGCACCGCGGGGGCCGTGGTGGGCGTACCCGAGGTGGTTATTATGGAAGAGGCGGAGGGTATGGCTATTCTGGACGAGGGAGGGGACGTGGCATGCCGAGTCGCACTTTCTAG 1761 0.4605 MASESASRSSSAADTYIGSLISLTSKMRSFGTEGRKKDGPQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQPTPQVNNDPAIIQSHFPHPVGTSTSLPPAVSGPLTDLSSHNQLGLPGSSFQGPLPLYQPGGNIGSWGASPPAPNANGGRLAMPPPMYWQGYYGAPNGLPQLHQQSLLQTPPGLSMPSSMQQPMHYPNFTPSLPTVSSNLPELPSSLLPVSASAHSVTSASLPPAPSALPPAPSALPPAPSALSPASSALSPKPTATLASEILPVSVINKAPNVSTSAAMLASNLPSLTNSGPDINARVPPISSKLHAISGSSLPYQTVSQLSPTVVGSSTSVHTETSSPSLVTPGQLLQPGPAIVSSAQPSQATHKDVEVVQVSSTSSPESSVPASAETQPPILPLPVTSQPSYRPGGAPIQSHHHGYNNYYRGRGRGRGTGGLRPVTKFTEDFDFTAMNEKFKKDEVWGNLGKSKSHSKDGEENSFDEDYQDEDNDDVSNIDVKPIYNKDDFFDSLSSNVHDNASQNGRTRYSEQIKIDTETFGDFVRHRGGRGGRTRGGYYGRGGGYGYSGRGRGRGMPSRTF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0605 586 SMART FDF_2 449 549 IPR019050 -
Aed11g0605 586 Pfam FDF domain 450 546 IPR019050 -
Aed11g0605 586 PANTHER SCD6 PROTEIN-RELATED 27 580 - -
Aed11g0605 586 MobiDBLite consensus disorder prediction 234 250 - -
Aed11g0605 586 MobiDBLite consensus disorder prediction 227 261 - -
Aed11g0605 586 MobiDBLite consensus disorder prediction 365 445 - -
Aed11g0605 586 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 27 580 - -
Aed11g0605 586 ProSiteProfiles TFG box profile. 529 549 IPR025768 -
Aed11g0605 586 ProSiteProfiles DFDF domain profile. 443 479 IPR025762 -
Aed11g0605 586 ProSiteProfiles FFD box profile. 507 522 IPR025761 -
Aed11g0605 586 MobiDBLite consensus disorder prediction 365 399 - -
Aed11g0605 586 Gene3D - 24 71 - -
Aed11g0605 586 MobiDBLite consensus disorder prediction 472 503 - -
Aed11g0605 586 SUPERFAMILY Sm-like ribonucleoproteins 16 69 IPR010920 -
Aed11g0605 586 MobiDBLite consensus disorder prediction 472 486 - -
Aed11g0605 586 SMART LSM14_2 10 87 IPR025609 -
Aed11g0605 586 Pfam Scd6-like Sm domain 25 66 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0605 Aed-Chr11 6179072 6184861 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0605 11 6179072 6184861 Aed11g0605 11 6179072 6184861 ECH