Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0601 ATGAGGAACTTCAAGGCTTTTAGTGAAAAAGTCATCATCACCATTGCTCTCTTCTTCTTCATAATCTCTCTTAGTGCAACAAGGTGCTATGGACAAGTAGTAGAACTTGATGATAACATCATGGCTCCAATGAAGAAAGCAGAGAGGGATGCTCTATACTCCACCATTCAAGGCTTTGTAGGTCATTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGCTGGACTCCTATTCAGGGGGTTTCTTGTGATTCTTTTAATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCCATGACAATTCTCTAAGTTGTGCCAAAAACTTAGAATTCAGACCACACTTGTTTGAGCTGAAGCACCTTAAAGCTATATCCATCTTCAAATGCTTTGAATCTTCACAACAACACAAGCACCAAGTTACCATCCCAAATGCAAACTGGGAAAGCCTTGCTGGCACCTTAGAATCACTTGAGTTCAGATCCAACAGAGGCCTCATTGGAAAAATCCCTTCAAGTTTTGGTGCCCTCAAGAACCTTCAGTCACTAGTACTATTAGAAAACGGTTTAACAGGTGAAATTCCACCACAAATTGGCAACCTCAACAAATTGCAGAGGCTAGTCCTTGCAGGAAACTACTTCAGTGGACACATTCCAGATATTTTCACTTCACTAGGTGACTTATTAATCCTTGATTTGAGTAGAAACTCACTCTCTGGCACTTTACCTTTAACACTTGGAAACTTAACTTCCCTTTTGAAGATTGACATTAGCCACAACAATTTGGAGGGTTATTTGCTGAAAGAATTTGCTCATCTCAAGAATCTGACCCTTATGGACCTTAGAAACAACAAACTCTCTGGAGGGTTGGCATTGAGTATTCAAGAGATGAATTCTTTAGAAGAAATGGTTCTGTCCAACAATGCAATAGGTGGAGATATCAGAACCTTGAAGTGGGAAAATCTTCATAACTTAGTCATTTTGGACCTCTCTAACATAGCGTTGAAAGGTGAAATTCCTGAGTCTATATCAGAATTGAAGAGGCTTAGATTCTTAGGCCTTAGTGACAACAACCTCACAGGGAAACTTTCACCAAAACTATCAACACTTCCTTGTCTCAATGCACTGTATGTTAGTGGCAACAATTTGGAAGGAGAGATTAAATTCTCTATGGAGTTTTTTGGAAAAATGGGAACTCGTTTTGGGGCATGGAACAATCCAAGCCTATGCTACCCTCTTGGAGTAATGCCAACAACAACAACAAGAAGTCATGTTCCATATGGGGTGAAACCATGCCATCAACAAGAGATTAAAATGCTAGAATCTAATGCTAATGCAAATGATGATGGTGATGTGAAGAGGACTTTCCATTCTTCCATAGCCTCTTCCTCTTTGAGCCATCATCATCATGCTACTTTTTATGGATTCTGGTGGACTTCTCTTCTATTGATGTTTGGTCTTTAA 1470 0.398 MRNFKAFSEKVIITIALFFFIISLSATRCYGQVVELDDNIMAPMKKAERDALYSTIQGFVGHWWNGSDLYPDPCGWTPIQGVSCDSFNGFWYVTVLNIGPIHDNSLSCAKNLEFRPHLFELKHLKAISIFKCFESSQQHKHQVTIPNANWESLAGTLESLEFRSNRGLIGKIPSSFGALKNLQSLVLLENGLTGEIPPQIGNLNKLQRLVLAGNYFSGHIPDIFTSLGDLLILDLSRNSLSGTLPLTLGNLTSLLKIDISHNNLEGYLLKEFAHLKNLTLMDLRNNKLSGGLALSIQEMNSLEEMVLSNNAIGGDIRTLKWENLHNLVILDLSNIALKGEIPESISELKRLRFLGLSDNNLTGKLSPKLSTLPCLNALYVSGNNLEGEIKFSMEFFGKMGTRFGAWNNPSLCYPLGVMPTTTTRSHVPYGVKPCHQQEIKMLESNANANDDGDVKRTFHSSIASSSLSHHHHATFYGFWWTSLLLMFGL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0601 489 Gene3D Ribonuclease Inhibitor 45 319 IPR032675 -
Aed11g0601 489 SUPERFAMILY L domain-like 53 389 - -
Aed11g0601 489 PRINTS Leucine-rich repeat signature 251 264 - -
Aed11g0601 489 PRINTS Leucine-rich repeat signature 230 243 - -
Aed11g0601 489 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 449 - -
Aed11g0601 489 Gene3D Ribonuclease Inhibitor 320 415 IPR032675 -
Aed11g0601 489 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 12 449 - -
Aed11g0601 489 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0601 Aed-Chr11 6061447 6064364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0601 144 445 Receptor kinase-like Gene Family AT1G17750 26.948 3.43e-20 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0601 11 6061447 6064364 Aed11g0601 11 6061447 6064364 ECH