Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0598 ATGACGGACATCACTGACGACATAGCGGAGGAAATCTCCTTCCAGGGCTTCGAAGATGACTGTAAATTGCTTGGGAACCTACTCACCGACATTCTTCAGAGAGAAGCTGGCTCCACCTTCGTTGACAAGCTCGAAAAAATTCGAGTCCTTTCACAGAGTGCTTGTAATATGAGACAAGCAGGAATAGAGGACATGGCTGAGATGCTAGAGAAGCAATTGGCTTCAGAATTATCCAAGATGACACTGGAAGAAGCTTTGCCCCTTGCTCGTGCCTTTAGCCATCATCTTACTCTGATGGGTATAGCTGAAACCCACCATAGAGTTCGTAAAGGCGGAAATATGGTTCTTGCTGCAAAATCTTGTGATGACATCTTTAACCATCTGTTGCAAGATGGGGTTTCTCAAGATGAGCTTTATAACACAGTGTGCAAGCAGAATTCGGTTCTAATTGCTATTGTCATTCAAAATCCAATTTCATTTATGTTGCCACAGGAGGTTGAGATTGTTCTCACAGCTCATCCTACTCAAATTAATCGTCGTACCTTGCAATACAAACATCTTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTAGCCATGAAGATCGAGAGATGGTGATTGAAGATCTGGTTTTGAGTGCAATTTACCCTTCCTTGCAGCACACAGGAAAAGCACTTCCATTGACTTGCACTCCAATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTGTCAAGATGGATGACAATTGACCTCTACATTCGGGAAGTGGATGGCCTGAAATTTGAGCTATCCATGAATCGGTGCAGTGATCAGCTATCAAGACTGGCACAGGAAATACTAGAAGTTGATGATCACTTCTTCTCTTCAGAATATAACAATGAGGAGGATAAGCATGAACCTTGGAATGAATCTACGAGTAGAAGTCAATTGAGAAATAATATTCAACAAGCTTCATCACTTCCAACTAAACTTCCAGCTGGAGCTCATTTACCCTCTTGTGCTGAAAATGTTGGAACTGAGTATCCCAGACACATGCAAGGAGCTGATCACAAGCACAATCACAAGGGTGGTGAGACTTCGAGTTCAACTGAGAAAAATGGTGGCAGTCCAAATGTCCGTTTGTCGATACCAATTTCACCAAAATCCAGTTCTTCATTAGCTTCAATGACACGCTCTCCTTCTTTCAACTCTAATCAACTTGCTGCTCAGAGGAAACTGTTTGCAGAATCCCAAGTAGGAAGGTCCAGTTTTCAGAGACTTTTGGATCCAAAGGTCCCTCAGCTTCCTGGAAATTCTCCTTATAGAGTTGTCCTTGGAAGTATAAAAGATAAGGAATCTGGCAGACATGCTGAAACAATTGATGCAATTACAACATATCTAGGTATGGGTACATACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTAGAGAGTTGAAAGGGAAGAGACCACTGGTTCCTCCCAGTATAGAGGTTTCTCCAGATGTTAGAGAAGTCTTGGATACGTTCCGAACTGCTGCCGAGCTAGGGAGTGAATCATTGGGTGCCTATGTGATCTCTATGGCATCAAATGCAAGTGATGTCCTTGCAGTGGAGCTTTTGCAGAAGGATGCACGACTTGCTTTTTGTGGGGAGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTCATCAGAAAGCTTTTGTCAATAGATTGGTACCGCCAACACATCATTAAAAACCATAATGGGCACCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCCGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTGGCTGCATGCAATGAGTATGGCATTAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCTATTCAATCTCAACCACCTGGCTCTGTCATGGGAACCCTTCGGTCAACCGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAGACAGCCGTTAGACAGCTTGAAATATACACAACAGCCGTGCTACTCGCCACCCTTCGTCCACCTCAACCGCCACGCGAAGAAAAGTGGCGCAATCTCATGGAAGACATTTCGAAGATCAGCTGCCAGTGTTACCGAAACATAGTGTATGAGAATCCAGAATTCCTGTCCTACTTCCATGAAGCCACACCTCAGTCAGAGCTCGGCTTCCTCAACATAGGCAGCCGCCCGACAAGGCGGAAGAGCACAACAGGAATTGGTCACCTCCGTGCCATTCCTTGGGTGTTTGCATGGACTCAAACCAGGTTTGTACTTCCAGCCTGGCTTGGAGTTGGAGCAGGCTTGAAAGGTGCTTGTGAGAAAGGACAAACTGATGAGCTAAAGGCAATGTACAAAGACTGGCCTTTCTTTCAAAGCACAATAGACCTAATTGAGATGGTTTTGGGAAAAGCTGATATCCCTATTGCCAAGCACTATGATGAAGTTCTTGTCTCACAAAAGAGACAAGAGCTTGGAAAGCAACTGAGGAACGAGCTCGTCACAACGAGCAAGTTTGTTCTTGCGGTTAGCGGCCATGAGAAGCCTCAGGAGAATAATAGGAGCTTGAGGAAGCTGATTGAGGGTAGGCTTCCCCTTCTGAACCCCATGAATATGTTGCAAGTAGAGATACTCAAGAGGCTAAGATGTGATGATGACAACCTTAAAGCCAGAGATGCATTGCTTATCACCATAAATGGTATTGCTGCTGGAATGAGGAACACTGGTTAA 2859 0.4484 MTDITDDIAEEISFQGFEDDCKLLGNLLTDILQREAGSTFVDKLEKIRVLSQSACNMRQAGIEDMAEMLEKQLASELSKMTLEEALPLARAFSHHLTLMGIAETHHRVRKGGNMVLAAKSCDDIFNHLLQDGVSQDELYNTVCKQNSVLIAIVIQNPISFMLPQEVEIVLTAHPTQINRRTLQYKHLKIAHLLDYNDRPDLSHEDREMVIEDLVLSAIYPSLQHTGKALPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMTIDLYIREVDGLKFELSMNRCSDQLSRLAQEILEVDDHFFSSEYNNEEDKHEPWNESTSRSQLRNNIQQASSLPTKLPAGAHLPSCAENVGTEYPRHMQGADHKHNHKGGETSSSTEKNGGSPNVRLSIPISPKSSSSLASMTRSPSFNSNQLAAQRKLFAESQVGRSSFQRLLDPKVPQLPGNSPYRVVLGSIKDKESGRHAETIDAITTYLGMGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVSPDVREVLDTFRTAAELGSESLGAYVISMASNASDVLAVELLQKDARLAFCGELRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPQPPREEKWRNLMEDISKISCQCYRNIVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSTTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGQTDELKAMYKDWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQKRQELGKQLRNELVTTSKFVLAVSGHEKPQENNRSLRKLIEGRLPLLNPMNMLQVEILKRLRCDDDNLKARDALLITINGIAAGMRNTG 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 214 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 464 952 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 223 464 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 214 - -
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 223 464 - -
Aed11g0598 952 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 952 IPR015813 GO:0003824
Aed11g0598 952 MobiDBLite consensus disorder prediction 380 415 - -
Aed11g0598 952 PRINTS Phosphoenolpyruvate carboxylase signature 650 679 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PRINTS Phosphoenolpyruvate carboxylase signature 783 809 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 PRINTS Phosphoenolpyruvate carboxylase signature 608 628 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Aed11g0598 952 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 952 IPR022805 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 MobiDBLite consensus disorder prediction 364 379 - -
Aed11g0598 952 Gene3D Phosphoenolpyruvate/pyruvate domain 266 348 - -
Aed11g0598 952 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 464 952 - -
Aed11g0598 952 MobiDBLite consensus disorder prediction 364 415 - -
Aed11g0598 952 MobiDBLite consensus disorder prediction 311 334 - -
Aed11g0598 952 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 610 622 IPR033129 -
Aed11g0598 952 Pfam Phosphoenolpyruvate carboxylase 224 321 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 Pfam Phosphoenolpyruvate carboxylase 464 952 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed11g0598 952 Pfam Phosphoenolpyruvate carboxylase 18 213 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0598 Aed-Chr11 6002323 6023752 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0598 11 6002323 6023752 Aed11g0598 11 6002323 6023752 ECH