Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0597 ATGATGCCCCCTCAGCAAGAAACCTCCATCACACCAAACATTCCGGCCATCGCCAACCGCCCTGAAAACAGCTCCGTCCACGCTGAACCTCCGAGTACCGCCGCCGCCACTGCCAACGACCTCAAGCCCACTCTCACTAGCAATAATGACACACACAACAATGATTCTCATCAGCACCACACAGCACTAGCAGCTCCTTCTTCAGCACCCAGATTTTCTATTCTTCACCAATCCTTGCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTTGGAAGGGACAAGAATGGTTGTGTATCTTCTCAAAAGCCAAAGCACACAAGGACAGTGCTGAATGGTGTGACGGGGATGGTGGGGCCCGGCGAGGTAATGGCAATGTTGGGTCCCTCAGGGAGCGGCAAGACCACCTTACTCACCGCCCTCGCTGGCCGTCTAGTCGGAAAACTCTCTGGCGCCATCACGTACAACGGCCACCCTTTCTCAACCTCCATGAAGCGTAACATAGGGTTTGTGTCCCAAGATGATGTGTTGTATTCTCACCTCACTGTTCTTGAGACTCTAACTTATGCTGCCATGTTGAAACTTCCCAAGAGTTTGACTAGGGAAGAAAAAATAGAGCAAGCTGAAATGATCATTGTGGAATTAGGGTTGTCTCGGTGTCGGAACAGTCCTATCGGTGGTGGGACCGCCTTGTTTCGAGGGATTTCGGGTGGGGAGCGAAAACGGGTTAGTATCGGACAAGAGATGTTGGTGAACCCTAATTTGTTGTTGCTCGATGAGCCGACGTCTGGGTTGGACTCCACCACGGCCCAACGCATCGTGGCGATGCTCCAGAGCCTCGCCCAAGTTGGTCGGACCGTGGTGACCACCATTCACCAGCCTTCGAGCCGGTTGTATTGGATGTTTGATAAGGTGATGTTGTTGTCAGACGGCTACCCGATTTATACTGGACAAACAGGTCGAGTTATGGGTTATCTTGAGACTATTGGGTTTGTACCTGCTTTTAATTTCGTGAACCCGGCTGATTTTCTTCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACAGGATGAGCAAATAGATCACCATGAGGATCAAGCTTCAATCAAACAGTTCCTAGTTTCATCCTATAAGAAAAACTTATACCCTCTTCTCAAGCAAGAGATTCATCAGAATCATAGAGAACTAGCATTTTTAACTTCAGGAACACCTAGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAGCAATTCATGGTTCTGCTTAAGAGGGGTTTAAAGGAAAGAAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTGTGGTGGCATTCTGATCCCTCACACATACAAGACCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCTCTCTTCAATGCCATCTTTGCTTTTCCGTTGGACCGGCCGATGCTGAAGAAAGAAAGATCATCAGCCATGTACCATCTCTCCTCCTACTATGTAGCCAGGATGGTAGGGGACTTACCAATGGAGCTTGTGCTTCCCACCATCTTTGTAACCATCTCTTATTGGATGGGGGGTCTCAAGCCATCTTTGGTAACATTTGTGTTGACCCTCTTGATCATGCTTTTTAATGTGCTTGTCTCTCAAGGAATAGGCCTTGCACTTGGTGCCATACTAATGGATGTGAAACAAGCCACAACCTTGGCTTCAGTGACCATGTTGGTGTTCCTTTTGGCTGGTGGTTACTACATTCAGAAAATTCCTCTCTTTATAGCTTGGTTGAAGTATATCTCTTTTAGTCACTATTGCTATAAGCTTCTTGTAGGAGTGCAGTACTCAGTGAATGAGGTCTATGAGTGTGGACAAGGGTTGCATTGTAAGATAAGGGATTTTCCTGCCATAAAGTGTCTAGGGTTTGATAGTTTGTGGGGTGATGTGGTTGTGTTGGCTGTAATGTTGATTGGATACAGAGTTGTGGCTTACTTGGCTTTGAGGATGGGGCTGTATCATTGA 2061 0.4726 MMPPQQETSITPNIPAIANRPENSSVHAEPPSTAAATANDLKPTLTSNNDTHNNDSHQHHTALAAPSSAPRFSILHQSLRPVTLKFEDVSYSITFGRDKNGCVSSQKPKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLVGKLSGAITYNGHPFSTSMKRNIGFVSQDDVLYSHLTVLETLTYAAMLKLPKSLTREEKIEQAEMIIVELGLSRCRNSPIGGGTALFRGISGGERKRVSIGQEMLVNPNLLLLDEPTSGLDSTTAQRIVAMLQSLAQVGRTVVTTIHQPSSRLYWMFDKVMLLSDGYPIYTGQTGRVMGYLETIGFVPAFNFVNPADFLLDLANGIVADVKQDEQIDHHEDQASIKQFLVSSYKKNLYPLLKQEIHQNHRELAFLTSGTPRSSENQWTTSWWEQFMVLLKRGLKERRHESYSGLRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSAMYHLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKIPLFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGQGLHCKIRDFPAIKCLGFDSLWGDVVVLAVMLIGYRVVAYLALRMGLYH 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0597 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 333 IPR027417 -
Aed11g0597 686 Pfam ABC-2 type transporter 296 361 IPR043926 GO:0140359
Aed11g0597 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 84 339 IPR003439 GO:0005524
Aed11g0597 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 56 683 - -
Aed11g0597 686 MobiDBLite consensus disorder prediction 1 65 - -
Aed11g0597 686 CDD ABCG_EPDR 81 321 - -
Aed11g0597 686 Gene3D - 84 332 IPR027417 -
Aed11g0597 686 ProSitePatterns ABC transporters family signature. 239 253 IPR017871 GO:0005524
Aed11g0597 686 Pfam ABC transporter 115 267 IPR003439 GO:0005524
Aed11g0597 686 MobiDBLite consensus disorder prediction 1 63 - -
Aed11g0597 686 Pfam ABC-2 type transporter 422 628 IPR013525 GO:0016020|GO:0140359
Aed11g0597 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 683 - -
Aed11g0597 686 SMART AAA_5 124 317 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0597 Aed-Chr11 5954705 5960177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0597 114 300 Calmodulin-binding Proteins AT2G36910 29.897 4.79e-14 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0597 11 5954705 5960177 Aed11g0597 11 5954705 5960177 ECH