Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0502 ATGCACTGTTTGTTGCTTCGTAACAACACCACCACATTCGCAGAGCCTCTTTCTTTGTTTGAGAGAGAGAGAGAGAGAACAAAAACAAACCCAACGAAATTTTGGTGTGGCAGATCACGAGTCCTCGGAAAAACTGCAATGGCTTTTATATCGGAGGTCAACATGAGCTTCTCCTCTCACTACATGGATGATGAATATGAGAAACTCTTCCGGAGAATGAACCCTCCCAGGGTTGTAATCGATAATGAAGCCCTCAAGAATGCCACTGTCATAAGGGTTGATAGTGCAAACAAGCATGGAATACTTCTTGAGGTTGTACAAATCCTCACTGATCTAAACCTCATCATAATTAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAGGTTACTGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTTGGTCCCGAATCTTGTGTTACATCTCCTATGAGATCTGTTGGGGTTAAGCAAACAATGGACCACACTGCAATTGAGCTCATGGGGAGTGATAGGCCAGGGCTTCTTTCAGAAGTGAGTGCTGTTCTGACCAACCTCAAATGCAACATAGTGAATGCAGAGGTGTGGACACACAACACCCGTGCTGCGGCTGTGATGCACGTAACTGATGAAGAAGCTGGTTCTGCCATCACTGATCCTCAGAGGCTCTCTATAATCAAGGAGCTTCTGTGCAATGTGCTTGGTGGTGGCAACAAGAAGAGGGGGGCTAAGACTGTTGTCACAGATGCAGCCACACACACTGATAGAAGGCTTCACCAGATGATGTTTGCTGATAGGGATTATGAAAGAGCTAATGATGATGATGACTTTGATGAGAAGCTAAGACCAAATGTGAATGTTGTGAATTGGTCTGACAAGGATTATTCTGTGGTTACTATTCAGTGTAAGGATAGGCCAAAGCTTCTCTTCGACACAGTTTATGCAGAAAGACAAAGAGTGATACAATGTCTTGCAGCTGCAATTGAGAGAAGAGTTTCTGAAGGTTTGAAGTTAGAACTGTGCACCACCGACAGAGTTGGACTTCTATCTGATGTCACACGTATCTTCAGAGAGAATAGCCTCACAGTAACAAGGGCAGAAGTGGCCACAAAAGGAGGCAAAGCTGTGAACACTTTCTATGTTCGTGGGGCTTCTGGTTTCCCTGTTGATTCCAAGAGCATAGAGTCCATAAGGCAAACAATTGGCAACACAATCCTTAAAGTAAAGGGTAGCCCTGAGGAGATGAAATCATCAGTTCCTCAGGATTCTCCCACCAGATCCCTCTTCAGTGGTCTTTTCAAGTCAAGATCTTTTGTCAACTTTGGCTTGGTTAAGTCCTATTCCTGA 1389 0.4377 MHCLLLRNNTTTFAEPLSLFERERERTKTNPTKFWCGRSRVLGKTAMAFISEVNMSFSSHYMDDEYEKLFRRMNPPRVVIDNEALKNATVIRVDSANKHGILLEVVQILTDLNLIIIKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEEAGSAITDPQRLSIIKELLCNVLGGGNKKRGAKTVVTDAATHTDRRLHQMMFADRDYERANDDDDFDEKLRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVYAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGASGFPVDSKSIESIRQTIGNTILKVKGSPEEMKSSVPQDSPTRSLFSGLFKSRSFVNFGLVKSYS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0502 462 CDD ACT_ACR_1 88 158 - -
Aed11g0502 462 ProSiteProfiles ACT domain profile. 178 265 IPR002912 -
Aed11g0502 462 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 54 327 IPR040217 -
Aed11g0502 462 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 329 460 IPR040217 -
Aed11g0502 462 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 54 327 - -
Aed11g0502 462 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 329 460 - -
Aed11g0502 462 Gene3D - 173 244 - -
Aed11g0502 462 CDD ACT_ACR_2 177 250 - -
Aed11g0502 462 SUPERFAMILY ACT-like 173 243 IPR045865 -
Aed11g0502 462 ProSiteProfiles ACT domain profile. 90 169 IPR002912 -
Aed11g0502 462 SUPERFAMILY ACT-like 86 153 IPR045865 -
Aed11g0502 462 Pfam ACT domain 179 229 IPR002912 -
Aed11g0502 462 Pfam ACT domain 89 149 IPR002912 -
Aed11g0502 462 ProSiteProfiles ACT domain profile. 351 427 IPR002912 -
Aed11g0502 462 SUPERFAMILY ACT-like 347 416 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0502 Aed-Chr11 4410959 4415779 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0502 11 4410959 4415779 Aed11g0502 11 4410959 4415779 ECH