Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0371 ATGTCTGAGGTTGTTCTTATTAAAGACTCAGCAGCAGCAGCCATAAAGCTGTTTGGTAGAACAATTTCTCTGACACGACACACCAACAACAACGTGGTTTCTTCTTCTGCTAATGATGAACCTGCTCCTTCTTCTTCTTCATCTTTTCCACGTGAAGTGAGCTCCACCCCGGAACAATATGAAGCTCAGAGCGATAAGTGGTGGCTACAAACAAGTCATTATTGTGGGGGCACTGTCAGCGAAACTGGATCCAACTTTAGTAATCCAAATTCTAAAGAACTATCAAGGAAAGAACTCACCTCAACACAAGATGAGGCCTCACATCAAACCCCAGAGGAACCAAAATCTCCAACAACATCTTCATGCAACCCCAAAACACCCTCAACTGAAAGAGAAACATCCTTGATGAAATCCTCAAAAAACAACAACGGAGACCAAAGCGACACAACAACAACAAGCGTGTCACAGGACAACAACAACAACAAAACTCTGAAGAAACCAGACAAGGTGCTACCCTGCCCTCGCTGCAACAGCATGGACACGAAATTCTGCTACTACAACAACTACAACGTGAACCAGCCTCGCTATTTCTGCAAGCACTGCCAGAGATACTGGACCGCCGGAGGCACCATGAGGAACGTTCCCGTCGGCGCCGGCCGCCGCAAGAACAAAAACTCCTCTTGTGTGTCGTCCCATTATCGCCAAATCATGGTTCCTGAGGCACTTCATAGCACTGCTGTGTTGACCTTTGGATCATCGGATTCCCCTCTCTGCGACTCCATGGCTTCTGTGTTGAGCCTCGCTGATAATACACAAAATGGTGTCGTCCTGAATGGGGATGAATACGATACTGTTATGTCTGAGAAGAGAGACATTGCTGCTACTACTAACTCAAACGAAGAGTCATTAATGGATGATAATAAGAGTTATCAATTGTGCTTCCCAGGTTCTTCTTCTTCCTCTTCTCCATGGCCTTATCCATGGAACCCTTCAATGACTCCTTCAGCTTTTTGCCATCCTGTGCCATTCTACTGGGGTTGCATGCCGCCACCACCCTCTTGGAGTGTAAATTACCAATCTGCCCCTGCTTCTGGTCCAAATTCACCAACCCTAGGGAAACACTCAAGAGATGGAGATATCTTGTTTCAGAAGCATGGTAGCACAGACATGGCTGCAGAAAACAACAACAACAAGAACAGTGTGTTGATTCCAAAGACACTGAGAATTGATGACCCTACTGAAGCTGCAAAGAGCTCCATTTGGTCAACGCTAGGGATCAAGAATGAGAAGGGAAATGGGCTTTTCAAGGCATTTGCTTCAAAGGGTGGTGACAGTGATGACAAGAACAACAACAACCATGTGAAATCCCCAGTGTTACAAGCCAACCCTGCTGCTTTGTCAAGGTCCCTTGTCTTCCATGAGAGGACATAA 1431 0.4612 MSEVVLIKDSAAAAIKLFGRTISLTRHTNNNVVSSSANDEPAPSSSSSFPREVSSTPEQYEAQSDKWWLQTSHYCGGTVSETGSNFSNPNSKELSRKELTSTQDEASHQTPEEPKSPTTSSCNPKTPSTERETSLMKSSKNNNGDQSDTTTTSVSQDNNNNKTLKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRYFCKHCQRYWTAGGTMRNVPVGAGRRKNKNSSCVSSHYRQIMVPEALHSTAVLTFGSSDSPLCDSMASVLSLADNTQNGVVLNGDEYDTVMSEKRDIAATTNSNEESLMDDNKSYQLCFPGSSSSSSPWPYPWNPSMTPSAFCHPVPFYWGCMPPPPSWSVNYQSAPASGPNSPTLGKHSRDGDILFQKHGSTDMAAENNNNKNSVLIPKTLRIDDPTEAAKSSIWSTLGIKNEKGNGLFKAFASKGGDSDDKNNNNHVKSPVLQANPAALSRSLVFHERT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0371 476 PANTHER CYCLIC DOF FACTOR 2 13 476 IPR045174 GO:0003700|GO:0006355
Aed11g0371 476 MobiDBLite consensus disorder prediction 97 111 - -
Aed11g0371 476 MobiDBLite consensus disorder prediction 112 161 - -
Aed11g0371 476 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 13 476 - -
Aed11g0371 476 ProSitePatterns Zinc finger Dof-type signature. 173 209 IPR003851 GO:0003677|GO:0006355
Aed11g0371 476 ProSiteProfiles Zinc finger Dof-type profile. 171 225 IPR003851 GO:0003677|GO:0006355
Aed11g0371 476 Pfam Dof domain, zinc finger 168 225 IPR003851 GO:0003677|GO:0006355
Aed11g0371 476 MobiDBLite consensus disorder prediction 79 171 - -
Aed11g0371 476 MobiDBLite consensus disorder prediction 79 96 - -
Aed11g0371 476 MobiDBLite consensus disorder prediction 31 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0371 Aed-Chr11 3143865 3147102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0371 156 475 C2C2-Dof Transcription Factor Family AT3G47500 44.986 2.71e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed11g0371 zf-Dof 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0371 - - gmx:100775201 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0371 11 3143865 3147102 Aed11g0371 11 3143865 3147102 ECH
Aed11g0371 11 3143865 3147102 Aed10g1055 10 9360934 9364906 ECH
Aed11g0371 11 3143865 3147102 Aed6g1582 6 19849705 19853408 ECH
Aed11g0371 11 3143865 3147102 Aed3g0382 3 2697817 2701715 ECH
Aed11g0371 11 3143865 3147102 Aed6g1582 6 19849705 19853408 PCT