Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed11g0207 | ATGGACGGTTACGACGGCACCGTCAGGCTCGGCGCCATCAACCTCAAGCACGATCGCGCCGCCGATTTCGACTCCGCCGCCGGCCCCGACGTCTCCGTCTCCTCGCCGGTCACGCGCCAGAAAGCCGCCGCCGCGAAGCAATTCATCGAGAATCACTACAAAAACTATCTACAAGGATTGCAGGATCGCAAAGACAGACGCAGAGCGCTTCAGATGAAAGTGCAAGAGTCTCAGGTATCGGCTGAGGAGCAGGAGGAAATGATGAGGAACTTGGCACGCCGAGAAACCGAGTACATGAGGCTTCAGAGACGTAAAATTGGAATTGATGACTTCGAGCAGTTAACCGTGATTGGGAAAGGTGCTTTCGGTGAGGTGAGATTATGTCGTGCTAAAGGTATGGGAGAGATCTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGTCGCGGACAGGTGGAACATGTTCGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTCAAACTCCATTATTCATTTCAAGATTCAGATTTCCTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACGTTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATTCTTGCTATTCACTCAATACATCAACACAACTATGTACATAGGGATATTAAACCAGATAACCTTATACTGGACAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCATCAATATTATTGGAAAATGAAGATCTTACTGGTCAAGAATCAACTAGTGAAACTGAAGGATATTCTGTCTCTCCTTGGTTGATGCCAAAGGAGCAATTACAGCAGTGGAAACGTAATCGCCGTGCATTGGCGTATTCAACTGTTGGAACTCTTGATTATATGGCACCAGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCGATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCCGACGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCCTGAAATTCCCTGAAGAACCCAAGATATCAGCTGAATCAAAGGATCTGATCTGTCGCTTACTTTGTGATGTTGACTCAAGACTAGGAACCAGAGGAGTAGAAGAAATAAAGGCTCATCCATGGTTCAATGGTGTTCAGTGGGACATGCTTTATGAATCAGAAGCTGCATATAAACCTACGGTTGATGGCCCACCATCTGTAACAGCAACTGTTGGACCTTGGCGGAAGATGCTAACTTCCAAAGACAACAATTTCATAGGATATACTTTTAAGAAGTCAGACGTCCTTAAATCACTCGAAAGTTCAGATGCAGATATCAGAGTAAATGAATCATCGAAAACCCCTTCATTGATTACCTTGTTAGGTCGGATTGATTTGCAAGATACTGTAATTCCAGAAAGTGAGCAGAAGCCAGAAGCTTGA | 1530 | 0.4412 | MDGYDGTVRLGAINLKHDRAADFDSAAGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQMKVQESQVSAEEQEEMMRNLARRETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKGMGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLENEDLTGQESTSETEGYSVSPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPEEPKISAESKDLICRLLCDVDSRLGTRGVEEIKAHPWFNGVQWDMLYESEAAYKPTVDGPPSVTATVGPWRKMLTSKDNNFIGYTFKKSDVLKSLESSDADIRVNESSKTPSLITLLGRIDLQDTVIPESEQKPEA | 509 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed11g0207 | 509 | Gene3D | Phosphorylase Kinase; domain 1 | 102 | 196 | - | - | |
Aed11g0207 | 509 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 412 | 469 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Aed11g0207 | 509 | Pfam | Protein kinase domain | 111 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g0207 | 509 | Gene3D | Transferase(Phosphotransferase) domain 1 | 197 | 428 | - | - | |
Aed11g0207 | 509 | SUPERFAMILY | Protein kinase-like (PK-like) | 92 | 427 | IPR011009 | - | |
Aed11g0207 | 509 | Coils | Coil | 74 | 104 | - | - | |
Aed11g0207 | 509 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 7 | 495 | - | - | |
Aed11g0207 | 509 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 7 | 495 | - | - | |
Aed11g0207 | 509 | ProSitePatterns | Protein kinases ATP-binding region signature. | 117 | 140 | IPR017441 | GO:0005524 | |
Aed11g0207 | 509 | SMART | serkin_6 | 111 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g0207 | 509 | ProSiteProfiles | Protein kinase domain profile. | 111 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed11g0207 | 509 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Aed11g0207 | 509 | CDD | STKc_NDR_like | 109 | 460 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed11g0207 | Aed-Chr11 | 1685461 | 1692300 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed11g0207 | 1 | 497 | AGC Kinase Gene Family | AT5G09890 | 75.146 | 0.0 | 794 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_NDR | Aed11g0207 | Pkinase | 2.2e-63 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed11g0207 | 11 | 1685461 | 1692300 | Aed11g0207 | 11 | 1685461 | 1692300 | ECH |