Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0207 ATGGACGGTTACGACGGCACCGTCAGGCTCGGCGCCATCAACCTCAAGCACGATCGCGCCGCCGATTTCGACTCCGCCGCCGGCCCCGACGTCTCCGTCTCCTCGCCGGTCACGCGCCAGAAAGCCGCCGCCGCGAAGCAATTCATCGAGAATCACTACAAAAACTATCTACAAGGATTGCAGGATCGCAAAGACAGACGCAGAGCGCTTCAGATGAAAGTGCAAGAGTCTCAGGTATCGGCTGAGGAGCAGGAGGAAATGATGAGGAACTTGGCACGCCGAGAAACCGAGTACATGAGGCTTCAGAGACGTAAAATTGGAATTGATGACTTCGAGCAGTTAACCGTGATTGGGAAAGGTGCTTTCGGTGAGGTGAGATTATGTCGTGCTAAAGGTATGGGAGAGATCTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGTCGCGGACAGGTGGAACATGTTCGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTCAAACTCCATTATTCATTTCAAGATTCAGATTTCCTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACGTTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATTCTTGCTATTCACTCAATACATCAACACAACTATGTACATAGGGATATTAAACCAGATAACCTTATACTGGACAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCATCAATATTATTGGAAAATGAAGATCTTACTGGTCAAGAATCAACTAGTGAAACTGAAGGATATTCTGTCTCTCCTTGGTTGATGCCAAAGGAGCAATTACAGCAGTGGAAACGTAATCGCCGTGCATTGGCGTATTCAACTGTTGGAACTCTTGATTATATGGCACCAGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCGATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCCGACGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCCTGAAATTCCCTGAAGAACCCAAGATATCAGCTGAATCAAAGGATCTGATCTGTCGCTTACTTTGTGATGTTGACTCAAGACTAGGAACCAGAGGAGTAGAAGAAATAAAGGCTCATCCATGGTTCAATGGTGTTCAGTGGGACATGCTTTATGAATCAGAAGCTGCATATAAACCTACGGTTGATGGCCCACCATCTGTAACAGCAACTGTTGGACCTTGGCGGAAGATGCTAACTTCCAAAGACAACAATTTCATAGGATATACTTTTAAGAAGTCAGACGTCCTTAAATCACTCGAAAGTTCAGATGCAGATATCAGAGTAAATGAATCATCGAAAACCCCTTCATTGATTACCTTGTTAGGTCGGATTGATTTGCAAGATACTGTAATTCCAGAAAGTGAGCAGAAGCCAGAAGCTTGA 1530 0.4412 MDGYDGTVRLGAINLKHDRAADFDSAAGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQMKVQESQVSAEEQEEMMRNLARRETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKGMGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLENEDLTGQESTSETEGYSVSPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPEEPKISAESKDLICRLLCDVDSRLGTRGVEEIKAHPWFNGVQWDMLYESEAAYKPTVDGPPSVTATVGPWRKMLTSKDNNFIGYTFKKSDVLKSLESSDADIRVNESSKTPSLITLLGRIDLQDTVIPESEQKPEA 509
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0207 509 Gene3D Phosphorylase Kinase; domain 1 102 196 - -
Aed11g0207 509 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed11g0207 509 Pfam Protein kinase domain 111 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0207 509 Gene3D Transferase(Phosphotransferase) domain 1 197 428 - -
Aed11g0207 509 SUPERFAMILY Protein kinase-like (PK-like) 92 427 IPR011009 -
Aed11g0207 509 Coils Coil 74 104 - -
Aed11g0207 509 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 495 - -
Aed11g0207 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 495 - -
Aed11g0207 509 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Aed11g0207 509 SMART serkin_6 111 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0207 509 ProSiteProfiles Protein kinase domain profile. 111 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0207 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Aed11g0207 509 CDD STKc_NDR_like 109 460 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed11g0207 Aed-Chr11 1685461 1692300 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0207 1 497 AGC Kinase Gene Family AT5G09890 75.146 0.0 794
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aed11g0207 Pkinase 2.2e-63 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0207 11 1685461 1692300 Aed11g0207 11 1685461 1692300 ECH