Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0201 ATGGAAGTTTCAGTTTCGAGTAGTCTTCAAAAGTTGTTGAAGACAGCTCCAATATCTAAAGCATTGGTCATCAGAATCAACTTGTTCTGTCTTGCCATCTTTCTGGTTGTTTATGCAACCCTTCTTCTCCGTCCATCTTCTTCTGTCTATTTCGAGAATGCAGCCTCCCTTGGAGAAAAAAGCATGAAGATGAAAGCAGTGTTGGAGGAACCACACTTGAAATCAAGGAAGCCAAAGCAGAACGCGACGAAGATAGAAGTGCCTAGCTTCTTTGGCGAAATGGGGAAAGGAATGAAGATAGGAATGGTGAACATGCAAGAAGATGATGTGAGTGAATGGAGAGAAACAAGCCATGTTTATTTCGAGAGGGTGTCAGAGTTTTTCAATTGGACAGATTTGTTTCCCGAATGGATAGATGAAGAGGAAGAAACCGATGTTCCATCATGCCCCGAGATACCAATGCCAGAATTCGCAGCATATGATGAAGGAATGGACGTGATCGTTGCCAAGTTACCATGCAATTACCCCAAAGAAGGGTGGGGAAGAGACGTTTTCAGGTTACAAGTTCATCTGATTGTGGCAAACTTGGCAGTGAAGAATGGGAAGAAGGATTGGAATTGGAAGACGAAAGTGGTTTTGTGGAGCAAGTGTAGGCCAATGCTGGAGCTGTTTCGGTGTAGCGATTTGGTTAAGCAGGAAAATGAGTGGTGGTACTATGAGGTTGATGTGAAGAGGTTGGAGCAGAAGGTTTCTTTGCCTGTTGGGTCCTGCAATTTGGCTCTGCCTCTGTGGGAACAAGGGATAGACAAGGTGTATGACACGTCGAACCTGGAACAAAGCGTTGAAAGCCAAGGTCGAGCGAAACGCGAGGCCTACGCGACAGTGCTCCACTCCTCGGAAGGCTACGTGTGCGGCGCGATAACGCTGGCGCAGACCCTCCTCCAGACGGGAACGAAGCGCGACCTGGTCCTCCTCCTCGACAGCTCCATCTCCGCCGAGAAGCGCCGCGCCCTGGAACTCTCCGGCTGGATGATCCGACTCATAACCCGGATCCGAAACCCGCGCGCCGAGAACGGCACTTACAACGAGTACAACTACAGCAAGTTCCGTCTGTGGCAGCTCACCGATTACGAGAGAGTGATCTTCATCGACGCCGACATCATCGTCCTCCGCAACCTCGACATTCTCTTCAACTTCCCGCAGATGTCCGCCACCGGTAATGACCAGTCCATCTTCAACTCCGGCATCATGGTCCTCGAACCCTCCAACTGCACCTTCGATGTTCTCATGTCACGCCGCCACGACGTCATCTCTTATAACGGTGGCGACCAGGGGTTCTTGAACGAGATCTTCGTGTGGTGGCACAGGTTTCCGCGGCGGGTGAACTACCTGAAGAATTTCTGGGCCAACACGACGATAGAGGCGAGTAGGAAGAACGCGATGTTCGGCGCGGAGCCGGCGAAGCTCTACGCAATTCACTACTTAGGGCTGAAGCCGTGGCATTGCTACAGGGACTACGACTGCAATTGGGACGTGCAGGATCAGAGGGTGTACGCCAGCGACGTCGCGCACAGACGGTGGTGGAGGGTGCACGACGCCATGGACGAGAGGTTGCAGAAGCTCTGTAGGTTGACGAGGCAGCGGAGGATGGAGTTGAACTGGGAAAGGAGAAAGGCTGGGAAGATAGGGTTGCCGGATATGCATTGGAAGATCAATATCACGGATCCTAGAAGAGCTGGCTCGCTTTTGATTGATTGA 1758 0.5137 MEVSVSSSLQKLLKTAPISKALVIRINLFCLAIFLVVYATLLLRPSSSVYFENAASLGEKSMKMKAVLEEPHLKSRKPKQNATKIEVPSFFGEMGKGMKIGMVNMQEDDVSEWRETSHVYFERVSEFFNWTDLFPEWIDEEEETDVPSCPEIPMPEFAAYDEGMDVIVAKLPCNYPKEGWGRDVFRLQVHLIVANLAVKNGKKDWNWKTKVVLWSKCRPMLELFRCSDLVKQENEWWYYEVDVKRLEQKVSLPVGSCNLALPLWEQGIDKVYDTSNLEQSVESQGRAKREAYATVLHSSEGYVCGAITLAQTLLQTGTKRDLVLLLDSSISAEKRRALELSGWMIRLITRIRNPRAENGTYNEYNYSKFRLWQLTDYERVIFIDADIIVLRNLDILFNFPQMSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVISYNGGDQGFLNEIFVWWHRFPRRVNYLKNFWANTTIEASRKNAMFGAEPAKLYAIHYLGLKPWHCYRDYDCNWDVQDQRVYASDVAHRRWWRVHDAMDERLQKLCRLTRQRRMELNWERRKAGKIGLPDMHWKINITDPRRAGSLLID 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0201 585 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 288 537 IPR029044 -
Aed11g0201 585 Pfam Glycosyl transferase family 8 326 501 IPR002495 GO:0016757
Aed11g0201 585 CDD GT8_Glycogenin 290 534 - -
Aed11g0201 585 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 11 579 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Aed11g0201 585 PANTHER GLYCOGENIN SUBFAMILY MEMBER 11 579 - -
Aed11g0201 585 SUPERFAMILY Nucleotide-diphospho-sugar transferases 290 538 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0201 Aed-Chr11 1620540 1624131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0201 64 584 Glycosyltransferase AT4G33330 65.913 0.0 727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0201 11 1620540 1624131 Aed11g0201 11 1620540 1624131 ECH
Aed11g0201 11 1620540 1624131 Aed7g2449 7 26282843 26286089 PCT