Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0197 ATGGCTGCCAGGAGTGAACACCACCAAACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTGGCGCACGAGAAAATTGAGAAACCTGAGATTGCTCATGGTCAAGCGTGCCAGAGCAAGAAAGGGGAGGATTTGACACTGCTCAAGACGGAATGCCAGAGGGTGGTGGGTGATGGGGTCTCTACATATTCAGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTGTTTATACCAAGGAGAATCTTCTAAATAATGTTTTAAGTGCAATTCCTCCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCTAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGGCAAAAATCTGGAACCACTGTCACCTTTGTCATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCGTACTTGAATCTTCTGATGGTGAACTTTATTACTTGTCTGCAGATCACAGGCTAGACACAAATGAAGAGGAGAGGGTGCGGATAACCTCTAGCGGTGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCACGATCTATTGGAGATATGGATATTGGTGAATTTATTGTCCCAGTACCGTATGTAAAGCAAGTGAAGCTGTCCACTTCTGGAGGCCGGCTTGTAATCTGCAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAGTAGCTCTTGATTGTTGTCGTGGAATGCCAGCTGATGCTGCTGCACCACATATTGTTAAAGAAGCTGTGCAAGCGAAAGGACTTAGAGATGATACAACCTGCATCATTGTTGATATGTTACAGCAGGAGAAGCCACCTGTTTCTGTGCCACAAAAGAGGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAATCTTCTGAATCATCCTCTTCTATTGACAAAGAATACATGGAGCCAGACGTAGTAGAGGAAATGTACGAGGAAGGGTCTGCCAGTCTTTCAGAGAGGTTAGATAGTAAATATCCAGTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAGTAGAGATAAAACCTGGAGAGGGTATTTCAATACATGAGGGTACGTCCGACTCTCAAAAGTTTCGTCCCTGGGATGGACCTTTCCTGTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCAACAGGTAGACCTAGTAGCAGTGGAAGTGACGAATGA 1290 0.4519 MAARSEHHQTVPLSVLLKRELAHEKIEKPEIAHGQACQSKKGEDLTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAVYTKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGELYYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTSGGRLVICSDGVWDSLPAEVALDCCRGMPADAAAPHIVKEAVQAKGLRDDTTCIIVDMLQQEKPPVSVPQKRPVKGMLKSMFRKKSSESSSSIDKEYMEPDVVEEMYEEGSASLSERLDSKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGTSDSQKFRPWDGPFLCSSCQEKKEAMEGKRSTGRPSSSGSDE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0197 429 Pfam Protein phosphatase 2C 58 277 IPR001932 -
Aed11g0197 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 294 IPR001932 -
Aed11g0197 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 423 - -
Aed11g0197 429 SMART PP2C_SIG_2 47 294 IPR001932 -
Aed11g0197 429 CDD PP2Cc 63 293 IPR001932 -
Aed11g0197 429 SUPERFAMILY PP2C-like 39 293 IPR036457 -
Aed11g0197 429 Gene3D - 31 301 IPR036457 -
Aed11g0197 429 MobiDBLite consensus disorder prediction 409 429 - -
Aed11g0197 429 PANTHER ALPHABET, ISOFORM E-RELATED 3 423 - -
Aed11g0197 429 SMART PP2C_4 27 292 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0197 Aed-Chr11 1571727 1576596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0197 1 428 PP2C-type Phosphatase Gene Family AT1G47380 76.457 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0197 11 1571727 1576596 Aed11g0197 11 1571727 1576596 ECH
Aed11g0197 11 1571727 1576596 Aed7g2444 7 26255012 26259694 PCT