Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0190 ATGAGTTATAGAAACTTAGTAACCATTCTTAGCATCGATGGGGGTGGCATTAGGGGCCTCATCCCCGCAACCATTATTCATTTCCTTGAATCTCAGCTTCAGGAATTGGATGGTCCAGAAGCAAGGCTTGCAAATTACTTTGATGTGATATCAGGAACAAGCACCGGTGGACTTGTAACAGCTATGATAACTGCTCCAGACACCAATAATCGACCACTTTTTGCTGCCAAAGATATCAAACCTTTTTACTTGGATCACTGTCCTAAAATTTTCCCACAGCATAGTGGCCTCTGTGGGACGAGAATAGCGGAGAAAATAAGATCTCTAAGAGGACCCATATATGACGGAAAATACCTCCATGATGTTGTCAAAGAGAAACTAGGAAACATTCGCTTGCATCAGACACTCACCAACGTTGTCATTCCTACCTTTGACATCAAGCGTTTACAACCCATTATTTTCTCATCTTACAAGATTAAGAATACCCCATGCATGGATGCGAAGCTCTCAGACATATGCATTAGCACGTCTGCTGCACCTACTTATCTCCCTGCTCACAATTTCAACAACCAAGATTCTAATGGGAACGTACACGATTTCAACCTCATTGATGGTGGTGTTTGTGCAAATAACCCGACCTTAGTTGCCGTGAACGAAGTTACAAAGCAAATCATAAAGCAAAATACTGATTTCTTTCCAATGAAGCCTATGGAATATGGTCGCTTCCTAATAATTTCAATAGGGACCGGGACAGCAAAAAATGAGGAAAAATTCAATGCAAAAATGGCTGCCAAATGGGGATTATACGGTTGGATAAAGCTAACCCATAGTGGTAGTAGAGCATTAATTGATGTTTTCTCTGAATCAAGTGCAGATATGGTGGATTTCCATTTATCTGCTGTCACTCAAGCACTTCATTCAGAAGATCATTACCTTCGAATACAGGATGACACATTGACCGGAACGGAATCATCATTTCACATTGCTACAAAGGAGAACTTGGAGAAACTTTGCCAAGTTGGAGAAAAACTGTTGAAGAAACCCGTCTCTAGGGTTTGCAAAAATACTTTCACAAGAGAGGAGACTCAGGGAAATGAGATCTCCACACACTAA 1113 0.4106 MSYRNLVTILSIDGGGIRGLIPATIIHFLESQLQELDGPEARLANYFDVISGTSTGGLVTAMITAPDTNNRPLFAAKDIKPFYLDHCPKIFPQHSGLCGTRIAEKIRSLRGPIYDGKYLHDVVKEKLGNIRLHQTLTNVVIPTFDIKRLQPIIFSSYKIKNTPCMDAKLSDICISTSAAPTYLPAHNFNNQDSNGNVHDFNLIDGGVCANNPTLVAVNEVTKQIIKQNTDFFPMKPMEYGRFLIISIGTGTAKNEEKFNAKMAAKWGLYGWIKLTHSGSRALIDVFSESSADMVDFHLSAVTQALHSEDHYLRIQDDTLTGTESSFHIATKENLEKLCQVGEKLLKKPVSRVCKNTFTREETQGNEISTH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0190 370 PANTHER PATATIN 2 353 - -
Aed11g0190 370 CDD Pat17_isozyme_like 6 356 - -
Aed11g0190 370 Pfam Patatin-like phospholipase 10 216 IPR002641 GO:0006629
Aed11g0190 370 SUPERFAMILY FabD/lysophospholipase-like 6 357 IPR016035 -
Aed11g0190 370 Gene3D Cytosolic phospholipase A2 catalytic domain 1 367 - -
Aed11g0190 370 PANTHER XYLOSE ISOMERASE 2 353 - -
Aed11g0190 370 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 10 217 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0190 Aed-Chr11 1529013 1532099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0190 2 352 Miscellaneous Gene Families AT2G26560 65.625 9.79e-168 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0190 11 1529013 1532099 Aed11g0190 11 1529013 1532099 ECH