Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0188 ATGGAAGCAACCAAAGGAGATGATAAACACCTTGTTACCGTGCTTAGTATCGATGGTGGTGGCATTCGGGGAATCATCCCAGGAATTATACTTGGTTTCCTTGAATCAGAGCTTCAGTTCGGCAGAACTATGCTTGGACCACAGTACAACGGCAAGTACTTACACAACCTTGTTAGGGAAAAACTAGGAGACATCAAATTGCACCAAACACTGACCAATGTCGTTATCCCAGCATTTGACATCAAGCACCTTCAACCCACCATCTTTTCCAGCTTTCAGACTTTGGTAGCCATGGCGGAAGTGACGAATCAAATATGCCACGAAGGGAAATATGGTAGCTTAAATGTGAAGCCAATGCAATACGATCGATTTTTGGTGATATCATTGGGAACAGGTTCTCAACAAAAGGAAATGAAATACACTGCTGCTGAGGCAGCTCAATGGGGGATCTTGAGTTGGGTTAGCACAACCAATGGTGGCACACCTTTGATTGATGCCTTTACTCATGCAAGTTCTGATATGGTTGACTTTCACATCTCCTCCGTTTTTCAAGCACTCAAATCTGAACATAACTATCTCCGAATCCAGGACGATACATTAACTGGGGACATGTCTTCAGTAGACATAGCCACGGAGAAGAATTTGAATGATCTCGTCAAAGTTGGAGAATTATTGTTAAAGAAACCTGTTTCTAAGACTAACTTGAAGACTGGCGTTCACGAACCTGTTAGCTCCCATGAAACAAATGAACAAGCCTTGAAGAGGTTTGCTGAGCGACTATCGAAACAAAAGCAATTTCGTAAATCTGAAGTGTCTGCCAATGAGAATCTCTAG 834 0.4257 MEATKGDDKHLVTVLSIDGGGIRGIIPGIILGFLESELQFGRTMLGPQYNGKYLHNLVREKLGDIKLHQTLTNVVIPAFDIKHLQPTIFSSFQTLVAMAEVTNQICHEGKYGSLNVKPMQYDRFLVISLGTGSQQKEMKYTAAEAAQWGILSWVSTTNGGTPLIDAFTHASSDMVDFHISSVFQALKSEHNYLRIQDDTLTGDMSSVDIATEKNLNDLVKVGELLLKKPVSKTNLKTGVHEPVSSHETNEQALKRFAERLSKQKQFRKSEVSANENL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0188 277 PANTHER PATATIN 9 39 - -
Aed11g0188 277 PANTHER XYLOSE ISOMERASE 94 272 - -
Aed11g0188 277 Gene3D Cytosolic phospholipase A2 catalytic domain 43 93 - -
Aed11g0188 277 Gene3D Cytosolic phospholipase A2 catalytic domain 2 42 - -
Aed11g0188 277 Gene3D Cytosolic phospholipase A2 catalytic domain 94 273 - -
Aed11g0188 277 PANTHER PATATIN 94 272 - -
Aed11g0188 277 PANTHER PATATIN 42 93 - -
Aed11g0188 277 SUPERFAMILY FabD/lysophospholipase-like 12 247 IPR016035 -
Aed11g0188 277 PANTHER XYLOSE ISOMERASE 9 39 - -
Aed11g0188 277 PANTHER XYLOSE ISOMERASE 42 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0188 Aed-Chr11 1515022 1517974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0188 28 269 Acyl Lipid Metabolism Gene Families AT4G37050 43.581 9.64e-74 230
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0188 11 1515022 1517974 Aed11g0188 11 1515022 1517974 ECH
Aed11g0188 11 1515022 1517974 Aed7g2438 7 26226372 26230698 PCT