Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0180 ATGAGTCTAATGTTGTCAATAAGATTGGTTTTGTGGTTCCTGTTATTGTCATGGTGCCACTTTGCCATCCCATGCGAGGCCAACCAACAAGGAGAATACCTTTATAAGTTGATTCGATCAAGGAGGGGTGATCAGAAACGCTCTTATGGAGAAGAAGCTCCTTCTTTGTCAAATCATAATAATGGTGATGACGATGACGGATATTTTTCTACGTCGTCGAGAAAGGTTTATGTTGTTAAGGAACAATCAGGGTTGATGGAAGGTGACAAAGTGAAGAAGGGTTTGCCGGGACAGCCAAAAGGGGTGGATTTTGATCAGTATAGTGGCTATGTTACGGTGGATGCTAAGGCGGGAAAAGCACTGTTTTACTACTTTGTGGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTAAATGGAGGGCCTGGCTGCTCTTCCTTTGGGTATGGAGCCATGCAAGAATTGGGACCTTTTAGAGTCAACAGTGATGGAAAAACACTTTACAGAAATGACTATGCATGGAACAACGTGGCAAACGTGATTTTCCTAGAGTCTCCAGCAGGAGTTGGCTTTTCCTATTCAAACTCTTCTTCCGAATACTCTTACACAGCTGGTGACAAAAGCACAGCCCTGGACTCTTACACTTTTCTTCTAAACTGGCTCGAGAGATTCCCACACTACAAAACTCGAGACTTGTTCATAACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCACACTATTCTCACTTATAATAAGCTCACAAATCAGACAGTTATCAACCTCAAAGGAATTGCGGTTGGGAATGGTTGGATAGATGATAATATGTGTTCAAAGGGAATGTATGACTATTTCTGGACCCATGCTCTGAACTCTGATGAAACCCATGAAGGAATTCAAAGGCATTGCGACTTTGAGAGTGGTAGCGTCTTATCAACTGAATGCAACAAATATCAAAGAACAGCGGATACTGAGATTGGAAAAATTGACATATATAACATATATGCTCCCCTTTGTCAATCAGCTGCAACAAAACCTGCTTCCACTCCTGCCACTAACTCTGACAGCGAATTCGACCCTTGTTCTGATGAGTATACCAAATCCTACTTAAATCTCGCGGAAGTACAAGAGGCTCTACATGCTAAAGCCTCAAAATGGGATTTTTGCGGCTCGGTGGGATGGACAGATAGCCAAGCAACAATTCTACCCACTATAAATTGGTTAATATCAAGTGGCATAAACATCTGGATATATAGTGGCGATACAGATGGTCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATGTCTTGAAACTTCCGGTGGAGACAGCATGGCGTCCATGGTATTCTAGCAATGAGATTGGAGGATACTTGGTTGGGTACAAAGGGCTCACATTAATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCACAACGAGCTCTAACCATGATCTCATTTTTCCTACGTGGACAACTTCCTCCTGAGTCCTGA 1524 0.4304 MSLMLSIRLVLWFLLLSWCHFAIPCEANQQGEYLYKLIRSRRGDQKRSYGEEAPSLSNHNNGDDDDGYFSTSSRKVYVVKEQSGLMEGDKVKKGLPGQPKGVDFDQYSGYVTVDAKAGKALFYYFVESPHNASNKPLVLWLNGGPGCSSFGYGAMQELGPFRVNSDGKTLYRNDYAWNNVANVIFLESPAGVGFSYSNSSSEYSYTAGDKSTALDSYTFLLNWLERFPHYKTRDLFITGESYAGHYVPQLAHTILTYNKLTNQTVINLKGIAVGNGWIDDNMCSKGMYDYFWTHALNSDETHEGIQRHCDFESGSVLSTECNKYQRTADTEIGKIDIYNIYAPLCQSAATKPASTPATNSDSEFDPCSDEYTKSYLNLAEVQEALHAKASKWDFCGSVGWTDSQATILPTINWLISSGINIWIYSGDTDGRVPITSSRYSVNVLKLPVETAWRPWYSSNEIGGYLVGYKGLTLITVRGAGHMVPSYQPQRALTMISFFLRGQLPPES 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0180 507 ProSitePatterns Serine carboxypeptidases, histidine active site. 471 488 IPR033124 GO:0004185
Aed11g0180 507 PANTHER CARBOXYPEPTIDASE 58 503 - -
Aed11g0180 507 SUPERFAMILY alpha/beta-Hydrolases 93 502 IPR029058 -
Aed11g0180 507 Gene3D - 407 501 - -
Aed11g0180 507 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 58 503 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 Gene3D - 367 398 - -
Aed11g0180 507 Gene3D alpha/beta hydrolase 85 354 IPR029058 -
Aed11g0180 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 223 248 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 185 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 196 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 Pfam Serine carboxypeptidase 96 500 IPR001563 GO:0004185|GO:0006508
Aed11g0180 507 ProSitePatterns Serine carboxypeptidases, serine active site. 237 244 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0180 Aed-Chr11 1435852 1441573 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0180 11 1435852 1441573 Aed11g0180 11 1435852 1441573 ECH