Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0179 ATGATGCAGGGAAGCTTGAGAAATGCAAATAAAAGTGGAAAAGCCTCTAGCAGAGAAAGAAAATTAGCTTTGCAACAAGATGTGGTTAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAATATTCACAGGGCATTGGAGAGGGCTTTCAACAGACCTTTGGGAGCTTTGCCACGTCTTCCTCCTTATCTCCCTCCCTGTATACTAGCCCTTCTGGCTGAAGTGGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAGGAGCAGGTTGTGCATTTCAGACAGGATTTGTACCAGGAAGCTGTCTACATGTCATCTTCTATGAGGAAACTGGAACATTCAGTTTCTACTCCTCCAAAAAACAAGTCAAACCCAACATTGGATAGTCCCAAGTTGGATAAATTCAAGGCTCAATCCCAAACAGCTAGTAATTCAACAGCAACATCTTCAACTAACCCTACCACAACACTCACTGAGGATAGACAAGGGAAAGAGAATCAATCCTGTAGTAATTCTTCCAAGAGCAGGCAGCAATCCTCCAACCAAATGAATAAAACTCCAATTAAAAAACTCGACGATAAATCACTGCAGAAAAGGTTGGATCATCCAAAAAGGAAGCAAGAACCAAGGGTGAACAACCAGCAAATTACAAATGTAAGAAATCATAGTCCACATAAAATTTCACCAGAAGCTGAGAATCCAAATATAATTTCAGAAAATATTCTAAAATGTTTATCAAACATTCTCTTAAGAATGAGTGCTGTGAAGAATCCAGGTTCTGCGTGTGACATGCCACCGTTGTGGGATCTAAGACCTCAAAAATGTGAGTTTGGGGATCCATATGGCATCTCTTTGGAATTTGGAAAGAGGGATATTGGTCCATACAAGCAATTATCTGCAATTGATGCTAAATCTTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACTACATCGGTTAAAACTTCTTTTTAGGAAATTATCCTCTGTCAACTTAGAAAACCTCAACCATCAGGAGAAGCTTGCATTCTGGATCAACATCTACAACTCATGTATGATGAATGCATTCATAGAGAATGGCATACCAGACAATCCTCAAATGGCTGTAGCACTAATGCGGAAGGCAACAATAAATGTTGGTGGACACGTGCTAAGTGCAACAACCATAGAGCATTTCATTTTGAGACTTCCTTATCACTGGAGATTTACATTTTCCAAGGGAACCAAAAATCATGAAATGACAGCAAGAAGCATGTATGGACTGGAACTGTCAGAACCCCTAGTGACATTTGCTCTCTCTTGTGGAACCTGGTCCTCTCCTGCGGTGAGAGTTTACACAGCATCCCAGGTTGAGAATGAACTGGAAGTGGCCAAAAGAGAGTACTTGCAGGCAGCAGTTGGAATTTCAACTTCAAAGTTTGCTATTCCAAAGCTGCTAGATTGGTATTTGCTGAACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATCTGTCTCCAGCTACCAAGTGAACTGGGGAAAGAAGCCATCAAATTCCTTGAGGAGAGAAAAACCGAGCCCCTCTCACAATTTATACAAATTATGCCATATGAGTTCAGCTTTAGATACCTGATATGCACATAA 1620 0.4056 MMQGSLRNANKSGKASSRERKLALQQDVVRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPCILALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLEHSVSTPPKNKSNPTLDSPKLDKFKAQSQTASNSTATSSTNPTTTLTEDRQGKENQSCSNSSKSRQQSSNQMNKTPIKKLDDKSLQKRLDHPKRKQEPRVNNQQITNVRNHSPHKISPEAENPNIISENILKCLSNILLRMSAVKNPGSACDMPPLWDLRPQKCEFGDPYGISLEFGKRDIGPYKQLSAIDAKSFNPKRTANTLFLLHRLKLLFRKLSSVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPDNPQMAVALMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNHEMTARSMYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREYLQAAVGISTSKFAIPKLLDWYLLNFAKDLESLLDWICLQLPSELGKEAIKFLEERKTEPLSQFIQIMPYEFSFRYLICT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0179 539 PANTHER TRANSCRIPTION FACTOR 3 538 - -
Aed11g0179 539 MobiDBLite consensus disorder prediction 208 222 - -
Aed11g0179 539 MobiDBLite consensus disorder prediction 110 184 - -
Aed11g0179 539 MobiDBLite consensus disorder prediction 185 207 - -
Aed11g0179 539 MobiDBLite consensus disorder prediction 1 21 - -
Aed11g0179 539 Pfam Leucine-zipper of ternary complex factor MIP1 17 98 IPR025757 -
Aed11g0179 539 Coils Coil 28 48 - -
Aed11g0179 539 Pfam Protein of unknown function, DUF547 332 461 IPR006869 -
Aed11g0179 539 PANTHER EXPRESSED PROTEIN 3 538 - -
Aed11g0179 539 Coils Coil 67 94 - -
Aed11g0179 539 MobiDBLite consensus disorder prediction 110 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0179 Aed-Chr11 1424814 1428852 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0179 11 1424814 1428852 Aed11g0179 11 1424814 1428852 ECH
Aed11g0179 11 1424814 1428852 Aed7g2433 7 26196220 26200067 PCT