Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0173 ATGGCACTAGCGGAGTTTTTCCGCGGCGAGATCTCATCGGACCTATGGAAAATGCTGGTGTCGATTTCCCGGAAAGCCTTCCGATGCAAGTCCAGCGCCGAGGGCCTCATCACCTACGTCCGGGAGCTTCTTCCGATGATCGAAGAGATTAAGTACTCCGGCGTGGAGCTTCCGGCGCCGCGCCAGTCGCAGCTGGACCGGCTCTCAGAGATCCTCCGCTCCGGCGTGGAGCTCTCGCACCAGGCGCTCTCCTCCTCGCGCTGGAACGTCTACCGCAACTTCCAGCTCGCCAAGAAAATGGAGAAGCTCGAGAAGCACGTGACGCGGTTCCTGCAGGTCCCCATGCAGGCGCACATACTCGCCGACTTGCACCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTCGATGCATCGAACCGGAGGATGGAGCGGTTGATCGGGGACATGAAGATTGGCGTCAACGCCGGGAACGGGGGAGGGTGGGTGGAGGAGGCTGTCAGGAGTATGCAGGAGGATGAGACTTGGGTCGAAGGGTGTAATGGGAATAACGGTTTTGGATCGGTTGGCTTGGACTTCGGGAAGAACAAGGTTTTGGAGGTGATTTGTACGAGGAATGATGTTTCGGTTCTCGGGATTTGCGGCTTTGGTGGCTCCGGGAAAACAACTCTCGCTAGAGAGGTCTGCAGAGATGATCAAGTCACACGTCATTTCAAGGACAGGATCTTGTTTTTAACAGTGTCACAGTCCCCGAATGTGGAGCAGCTGAGAAAGACGATCTGGGAACACGTGATGGGCAAGCAAGGTTTGACTGGAAATTATGCGGTTCCACAATGGATGATGCCACAATTTGAGTGTAAAGTGGAAACTCAAGCACTTGTTGTTCTGGATGATGTGTGGTCACTCCCCGTGCTGAAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCCAGATTTAACTTCCCCACAATTTGTGATGTCACTCATCATGTGGAATTGCTGGATGAACAGGATTCTCTCTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTTCGGGTGCTAATTTGAGTTTGGTCAAGCAGGTTGTGGCTGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAATGAGATGTTTTGGTTGAGTGTTAAAACCAGGCTCTCTCAAGGTAAAAGCATAGGTGAATCCTATGAAAACGATCTGATTAATAGAATGGCTATTAGTACCAACTACCTGCCAGAAAAGATCAAGGAGTGTTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAGATTCCTCTGGAAGTTCTAATCAATATGTGGGTGGAAATTCATGACATTCACGAAACGGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTCCTCACCTTAGTCAAAGAGGCACGTGCCGGGGGCATGTATAGTAGTTGCTTTGAGATTTCTGTCACCCAACATGATATATTGAGGGACCTTGCTCTTAATTTGAGCAACCGTGGCAGCATTCATCAACACAGAAGGCTAGTTATGGCAAAACGAGAAGAAAATGGACAACTCCCCAAAGAATGGTCTAGATACAAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGTGAAATGACCAAAATGGACTGGATTGAGCTGGATTTTCCAAAGGCTGAAGTGTTGATCATTAATTTCGCGTCTAGTGATTACATTTTACCTCCCTTCATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTACCTCATATGCCCGCCTTCACAATGTCTCAGTTTTTAGGAATTTGACAAACTTGAGGAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTACCAGGCACTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAGATTAACAATAGTTTGGAAGGGAAACAGTTCCCTAACCTCTCTGAGCTCACGCTTGATCACTGTGATGATCTAACACAATTGCCCTCAAGCATTTGTGGAATAAAGTCACTACAAAACTTGAGTCTCACCAACTGCCACCATTTGAGTCAACTACCTGTTGAATTTGGCAAACTAAGATCACTAGAGATCCTCCGTTTATATGCCTGTCCAGTTCTGGAAACTCTTCCTCCTAGCATGTGTGACATGAAGAAATTGAAGTATATTGACATTTCTCAATGTGTTAATCTCACATGCTTCCCTGAAGAGATTGGTAGATTAGTAAGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGAATAGTTATTTACCAAAGTCTGCGGTGTCATTGCAATCTCTGCAGCTTGTGATTTGTGATGAGGAGGTATATGGTATGTGGAGAGATGTTGAGATGGCCCAGCCAAATGTTCGTATTCAAGTAGCAGAACAACACTATGATCTAGATTGGCTTCAAGAGTGA 2484 0.469 MALAEFFRGEISSDLWKMLVSISRKAFRCKSSAEGLITYVRELLPMIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADLHHVRFEMAERFDRVDASNRRMERLIGDMKIGVNAGNGGGWVEEAVRSMQEDETWVEGCNGNNGFGSVGLDFGKNKVLEVICTRNDVSVLGICGFGGSGKTTLAREVCRDDQVTRHFKDRILFLTVSQSPNVEQLRKTIWEHVMGKQGLTGNYAVPQWMMPQFECKVETQALVVLDDVWSLPVLKQLVWKIPGCKFLVVSRFNFPTICDVTHHVELLDEQDSLSLFCHHAFGQKSIPSGANLSLVKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKTRLSQGKSIGESYENDLINRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDILRDLALNLSNRGSIHQHRRLVMAKREENGQLPKEWSRYKDQPFEAQIVSINTGEMTKMDWIELDFPKAEVLIINFASSDYILPPFINKMPNLRALIIINYSTSYARLHNVSVFRNLTNLRSLWLEKVSIPQLPGTVLQNLGKLFVVLCKINNSLEGKQFPNLSELTLDHCDDLTQLPSSICGIKSLQNLSLTNCHHLSQLPVEFGKLRSLEILRLYACPVLETLPPSMCDMKKLKYIDISQCVNLTCFPEEIGRLVSLEKIDMRECPMNSYLPKSAVSLQSLQLVICDEEVYGMWRDVEMAQPNVRIQVAEQHYDLDWLQE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0173 827 PRINTS Disease resistance protein signature 211 226 - -
Aed11g0173 827 PRINTS Disease resistance protein signature 287 301 - -
Aed11g0173 827 PRINTS Disease resistance protein signature 735 751 - -
Aed11g0173 827 PRINTS Disease resistance protein signature 374 388 - -
Aed11g0173 827 Gene3D - 189 331 IPR027417 -
Aed11g0173 827 Gene3D Ribonuclease Inhibitor 550 806 IPR032675 -
Aed11g0173 827 Gene3D - 338 417 IPR042197 -
Aed11g0173 827 Gene3D - 420 510 IPR036388 -
Aed11g0173 827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 824 IPR044974 GO:0006952
Aed11g0173 827 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Aed11g0173 827 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 824 - -
Aed11g0173 827 Pfam NB-ARC domain 197 405 IPR002182 GO:0043531
Aed11g0173 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 439 IPR027417 -
Aed11g0173 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 13 133 IPR008808 -
Aed11g0173 827 SUPERFAMILY RNI-like 572 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0173 Aed-Chr11 1381063 1385021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0173 617 798 Receptor kinase-like Gene Family AT4G08850 26.842 8.86e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0173 11 1381063 1385021 Aed11g0173 11 1381063 1385021 ECH