Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0167 ATGCTAAGAGACGAAAGCGTGGGTTCCAGAAGCGCCAGGCACAGCGCCACCACCGTCTCCAACAAGGTTCTCGTCGCCGTCAAGGCCGACAAGATCATCTCCAACACCGCATTAGCCTGGGCTCTCACTCATGTCCTTCACTCCTCCGACTCCATCACACTTCTCGCTGTTTACTCTCCCAACAATACCGGTGGTAGACGAAGGTTCTGGAATTTTTCGAGATTCGCCAGAGACTGTACGAACGGACCGGCGGGAAAGTTGCCGGAGCAAATTTCCAATATCTCCGAGTCCTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATTGAGGTTAGGGTGAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAAGCATTGCATGGATGAACTAAACTGTAGCATAGTGGTGATGAATGGCTCACAGGCAAAAATCCTCAGGCTTAACTTAGGGTGCTCCGAAGAACTCCAAACTCCTTTTTTCTCTGCTGCTTCGTCACCTGGTATAGAAATTTCAAAGCTAAAGGGCAGAAAATTGAAGCATTCTACCCCAGTGAGTAGCCCTGAAGAAGCAGGTACTTCTGTTACAAGAAATATAGGAGTAAATTCAGTGTCAAGTTCTGACTCGACGACTTCTCTCTTCCTAGTCTATGAACAAAACCCTCTGTACGAGGGTCAGTGCCCAGAGAGAAAAACACACAATTCAATCAACGAACCAAAAGGCTTCAACGTCCAGCCACCATTATACTTCGATCTTGAAAGAGATCGCCCTCCTCCTTCTTCATGGACACGCCCAACAACATCTGTGGCTAGTGATAACAAGACTGTATTTTGGATTCCTCAAAACCACATTGTAGGCGAGAAGTTTCAGAAAACTAAAAACAACAGTGTTATCCAAAGAACTAAATCTCCAAATTCGAAGACTTTACTTGAGAATTTCATACGTTGTGATCAAGAGATGAGGACAAATGAACTTGGGTTTGACCAAGCTCAAAGTAGAAGAAGTTATGTTCCCAACTCGGGCATAAGAGATGATAATAACTCCATTCCTTTGGTCAGAAGAACTACCTCTATACCTCCTCCCTTATGCTCACAGTGTCAGAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGATTTTCTTACAAAGAGCTAGAGGAAGCTACTGATATGTTCTCGGATGAGAGTTTTTTGGCTGAAGGTGGATTTGGTGTGGTCCACAAGGGAATACTCAAAGATGGACAGGTTGTTGCGGTGAAACAGTTGAAGTTTTGTGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGATTTTGAGCTGTGCACAACACAGAAATGTTGTACTGTTGACAGGATTTTGTATAGAGAGCAATTTGAGGATATTAGTCTATGAGTACATATGCAACGGATCCTTGGACCTCTATTTATATGGTACAGTGGCTGATTTTGGGCTTGCTAGATGGCACTCAGAATGGAATATAGATACTGAAGATCGCGTTATAGGAACATCAGGTCATATCTTACAAAACGTTCGTTCTCTCAAACCAGGCTTCGATTCTGAGGAGTCATTGGAATTTAATCTTCAATTGCAAGCCATGGCACGAGCTGCTTCGTTGTGTCTACGTGTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGTTGGAAGGGGGTGATCCAGTTCGGCCTATAGGTTTAGACATCAATTCAGTTGGTAGCACAAGTGGCCGTTTAGGTGATTTGAAGTCACACACTACTCCACCAAAAGGTACAATTAGTCATTCTCGTAGACTATCACATTGA 1887 0.4473 MLRDESVGSRSARHSATTVSNKVLVAVKADKIISNTALAWALTHVLHSSDSITLLAVYSPNNTGGRRRFWNFSRFARDCTNGPAGKLPEQISNISESCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSQAKILRLNLGCSEELQTPFFSAASSPGIEISKLKGRKLKHSTPVSSPEEAGTSVTRNIGVNSVSSSDSTTSLFLVYEQNPLYEGQCPERKTHNSINEPKGFNVQPPLYFDLERDRPPPSSWTRPTTSVASDNKTVFWIPQNHIVGEKFQKTKNNSVIQRTKSPNSKTLLENFIRCDQEMRTNELGFDQAQSRRSYVPNSGIRDDNNSIPLVRRTTSIPPPLCSQCQNKAPVFGKPPKRFSYKELEEATDMFSDESFLAEGGFGVVHKGILKDGQVVAVKQLKFCGSQADLDFCREVRILSCAQHRNVVLLTGFCIESNLRILVYEYICNGSLDLYLYGTVADFGLARWHSEWNIDTEDRVIGTSGHILQNVRSLKPGFDSEESLEFNLQLQAMARAASLCLRVDPDARPPMSKILRVLEGGDPVRPIGLDINSVGSTSGRLGDLKSHTTPPKGTISHSRRLSH 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0167 628 CDD USP_Like 22 140 - -
Aed11g0167 628 ProSiteProfiles Protein kinase domain profile. 416 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0167 628 MobiDBLite consensus disorder prediction 210 231 - -
Aed11g0167 628 MobiDBLite consensus disorder prediction 603 628 - -
Aed11g0167 628 MobiDBLite consensus disorder prediction 204 231 - -
Aed11g0167 628 SUPERFAMILY Protein kinase-like (PK-like) 401 584 IPR011009 -
Aed11g0167 628 Gene3D HUPs 8 175 IPR014729 -
Aed11g0167 628 Gene3D Phosphorylase Kinase; domain 1 384 491 - -
Aed11g0167 628 PANTHER OS01G0253100 PROTEIN 17 503 IPR045271 GO:0004714|GO:0006468
Aed11g0167 628 PANTHER OS01G0253100 PROTEIN 534 617 IPR045271 GO:0004714|GO:0006468
Aed11g0167 628 PANTHER OS01G0253100 PROTEIN 504 532 IPR045271 GO:0004714|GO:0006468
Aed11g0167 628 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 503 - -
Aed11g0167 628 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 534 617 - -
Aed11g0167 628 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 504 532 - -
Aed11g0167 628 Pfam Protein tyrosine and serine/threonine kinase 421 504 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0167 Aed-Chr11 1335186 1341315 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aed11g0167 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0167 11 1335186 1341315 Aed11g0167 11 1335186 1341315 ECH