Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0153 ATGAATAACAATTATGTTGTGTTTCTCTTCACACTAACCTTTGTTGTTGTTCTTCTTTCATTAAATGGAACCAAAGCACAGCAGAATTACTCAGGGAATTCAATATTCAGCTGCAAGAACGATGACAAAACGGGGCCTTCACCTTCCTTCCTCTACACCTGCAACGGCCTCAACAAAACCTGCACGTCCTTCCTCATCTTCAAATCCAAACCCCCTTTCAACACCATAGCCGCAATCTCCAACCTCACATCATCAAACACACAAGAGCTTGAAAGAATCAACAAAGCCACGTTGCTCACAGTGTTCACAACTGGGAAAGAAGTGATTGTCCCTGTAAACTGCTCTTGTTCAAGTACTACAAGGGATCACTATTACGAAGCCGAAACCAAATACGTGTTGGAGCCATTCCCAACATATTTGACAGTGGCCAATGACACTTTTCAGGGTTTGACCACTTGTGATTCCCTCATGCGTGCTAATCCATTTGGCGAACTTGATTTGCTTCCAGGCATGGAACTGCACGTGCCACTCAGGTGCGCCTGTCCTACATGGAATCAGATCACTAACGGCGCCAAGTATTTAGTGACATACTCAGTGTACTGGGGTGATAACATTACAAATATCGCTACAAGGTTCAATGTAGCAGCAAGTAATGTTGTTGATGCCAATGGTTTGAACACGCAACCACAAACTCTTTTTCCATTCACAACTGTTCTGATTCCTTTGCCTAGTGAACCTGTGAGTTCAATGACCAGAGTTGTTAGGGATCCACCGGATATGTCACCTCTTAATGTTTGCAGCTCCAAAAACTGCAATTCGAAGAGGAAACTCCACACTGCTATTGCCATCACTGGGGGTTCCATGCTGGTTCTTCTGTGTGTTGTCTTATATGGGGTTTTTCTGTGCAGAAAGAGATCAGCAAGGTTCATTAAGAGAGGTGAAGAAGGTGAGAAAGCAAAGAAGTTGTCTTCGGACAATATCCGCGGGGAGATAGCAATCATTGAACATCACTCCAAAGTGTATAAACTTGAGGAAATAGAGGAGGCCACTGAAAATTTTAGTTCAAAGAGTAGAATTAAAGGTTCTTCTGTGTTTCGTGGGGTGTTTGGTAAAGAGAAGAATATGTTGGTTGTCAAAAGAATGAGAGGAGATGCATCCAAGGAAGTGAATTTGTTGGAAAGGATCAATCATTTCAACCTGATAAAGCTGCGAGGCTACTGCGAAAACGATGGTGGCCCTTACCTTGTTTATGAGTATATGGAAAATGGCTCTTTGAGTGAATGGCTTAGCAGAAACGGGTCCATGGTACACCAGAATTTGCCAAGGAGGATCCTCATTGCTCTGGATATTGCCAATGGTCTTCAGTATCTTCACAACTTCACAGAGCCTTGCTATGTGCACAGGAACATAAACAGTGCAAACATTCTACTAAACAAAGATCTGAGGGCCAAGATAGCAAACTTTGCTCTTGCTGAGGAATCAGAAAGTGAAATGACTTCATCCGATTGTACCTTGTCACACGTCGCGAAATCAAGGGGCTATATGGCACCGGAGTATCTGGAGGCAGGGATGGTCACTACCAAAATGGATGTTTATGCCTTTGGAGTGGTGCTGTTGGAATTGATCACGGGTAAAGATTCCGTTACCCTACAAGATGGGAGAGAGGTAATGCTTCATGCAATCATAGAGAATCTCATTGGCAAAGAGTATGAAGAAGAGAAGGTGAATTTGTTCATTGATGATCCTAGCCTCACTGGAAAGAGTGAGAAAGTATGTGCTCTGCAGCTAGTAAAACTTGGTCTAGCTTGCTTGATCCAAGAACCAGCAGAGAGACCAACCATGGTAGAGGTAGTCTCTAGCTTATTGAAAATATATTCAAGTTATATGGAGCAAATCATACAACCTAGCCTCAGCAACAGTTCTAGCATGGAGAGGTGA 1938 0.4314 MNNNYVVFLFTLTFVVVLLSLNGTKAQQNYSGNSIFSCKNDDKTGPSPSFLYTCNGLNKTCTSFLIFKSKPPFNTIAAISNLTSSNTQELERINKATLLTVFTTGKEVIVPVNCSCSSTTRDHYYEAETKYVLEPFPTYLTVANDTFQGLTTCDSLMRANPFGELDLLPGMELHVPLRCACPTWNQITNGAKYLVTYSVYWGDNITNIATRFNVAASNVVDANGLNTQPQTLFPFTTVLIPLPSEPVSSMTRVVRDPPDMSPLNVCSSKNCNSKRKLHTAIAITGGSMLVLLCVVLYGVFLCRKRSARFIKRGEEGEKAKKLSSDNIRGEIAIIEHHSKVYKLEEIEEATENFSSKSRIKGSSVFRGVFGKEKNMLVVKRMRGDASKEVNLLERINHFNLIKLRGYCENDGGPYLVYEYMENGSLSEWLSRNGSMVHQNLPRRILIALDIANGLQYLHNFTEPCYVHRNINSANILLNKDLRAKIANFALAEESESEMTSSDCTLSHVAKSRGYMAPEYLEAGMVTTKMDVYAFGVVLLELITGKDSVTLQDGREVMLHAIIENLIGKEYEEEKVNLFIDDPSLTGKSEKVCALQLVKLGLACLIQEPAERPTMVEVVSSLLKIYSSYMEQIIQPSLSNSSSMER 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0153 645 Pfam LysM domain 202 241 IPR018392 -
Aed11g0153 645 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 632 - -
Aed11g0153 645 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 10 632 - -
Aed11g0153 645 Gene3D LysM domain 185 251 IPR036779 -
Aed11g0153 645 Gene3D Transferase(Phosphotransferase) domain 1 420 640 - -
Aed11g0153 645 Pfam Protein tyrosine and serine/threonine kinase 383 621 IPR001245 GO:0004672|GO:0006468
Aed11g0153 645 SUPERFAMILY Protein kinase-like (PK-like) 335 631 IPR011009 -
Aed11g0153 645 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Aed11g0153 645 ProSiteProfiles Protein kinase domain profile. 304 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0153 645 ProSiteProfiles LysM domain profile. 195 240 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0153 Aed-Chr11 1185275 1187212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed11g0153 PK_Tyr_Ser-Thr 1.2e-36 CL0016