Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0147 ATGGAGTTCATGGTTCGGTGCTGTAGTTCGTGCGGGGTGTCCAGATTTCGTTTCAGCCTTCGATTCGCCGTCGTTGTTTTCGAGATTGTATTGATACTGGCATGGTTGGAAGTCAACAATGCAAAGCACCAAGAACACCAATTTCAATGGGAAGGTTCGGAAGGGAGGATTGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAGCGACCTGGTCGCAAGGTTTATTCAGTTACCCCACAGGTGTATGAGCCTGGTCTCTTGAAAGCCCTCCAGCATAAAGGCAGGGCATTACTTGGTGTATCAACATCAGCAGAGTTGCAAGGGAATGAAAAGCTACCTATTAGGATATATCTAAATTATGATGCTGTTGGTCACTCCCCTGACAGGGATTGTAAAAAAATTGGTGATGTTGTCAAGCTTGGGGAGCCTCCCATGATTTCTCTTCCTGGTTTGCCTTCTTGTAATCCTCTTGCTGATCCTCCAGTCTTAGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGAAGAGCATTGTCTGTTGAGCCTGTCAAGGGAAACTTGAGATTAAGTGGGTACTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCATGAATATGTTGAAGAGGGAGTCTCTGATGCTGACTTAGTTCTCTTGGTGACTACAAGACCTACAACGGGAAACACACTTGCTTGGGCCGTGGCATGTGAACGGGACCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCTCATGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGCCGTAAAAAGGTTACCGAACAAGTAATGGATGAAAAGATTGGGCGGACGGTAACACGTGTGGTGCTTCCACATGTTGTCATGCATTCTCGACATCATTATGCGGCATTCTCAGGAAATTTTACTGGCTTAGAGTTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAGAGACTCCTGATGAATGAGATCATGACTGGTTCCGTGGATACAAGATCCGTAGTTTCAAAAATGACACTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGACTTGATTGGGGTCGTAGCCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAAGGGGCCTATCATTGCAACACAACTCAGTTCTCTGGTTGTACTTATAACAGAGAGGCAGAGGGTTACTGCCCAATTCTAACCTACAGTGGAGACCTTCCTCAGTGGGCTCAGTATTTTCCTCAAGCTAATAAAGGAGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAGCAGTGCACGGGCACCTGATAGAATGCTAGGTGAAGTTCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTCTGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGCCCTTGGGCTGGTGGACACATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACAGATCCAGTGGTCGTGTCTGGGCAATGTCCCAGTGCATGTAATTTCAATGGAGACTGTGTTGATGGAAGGTGCCACTGCTTTCTCGGATTTCATGGTCATGATTGTAGTAGACGTTCCTGCCCCAGCAATTGTACTGGCAATGGCATGTGCCTCTCCAGTGGAATATGTGAATGTAAAACTGGCTATACTGGCATTGACTGTTCTACTGCTGTTTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTTCGCTGTTCTGACTATGCGGGATACACTTGCCAGAACAGCTCCATGCTCCTCTCCAGTCTTTCAGTTTGCAGAAATGTGCTGGGAAATGATATTTCCGGGCAGCATTGTGCTCCCAGTGAATCTAGCATACTACAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCATAGATTATTCCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGCAGCTCCTACTGTGATGAGGCAGCTAAAAGGCTTGCATGCTGGATCTCAATCCAGAAGTGCGAGAAGGATGGAGACAACAGGCTACGAGTATGTCATTCTGCGTGTCAGGCTTATAATCTAGCATGCGGAGCTTCGCTGGATTGTGGTGACCAAACCCTTTTCAGCGGGGAGGGGGAGGGGGAGGGTCAGTGCACAGGCTCTGGTGAGATGAAATTATCATGGTTTAATCGACTGAGAAATAGTTTTTCTTTGAGAAACAGTTCCTCCAAAGGAATATCTTTAAGATATAGGCAGTTTTAG 2586 0.4586 MEFMVRCCSSCGVSRFRFSLRFAVVVFEIVLILAWLEVNNAKHQEHQFQWEGSEGRIENIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPGLLKALQHKGRALLGVSTSAELQGNEKLPIRIYLNYDAVGHSPDRDCKKIGDVVKLGEPPMISLPGLPSCNPLADPPVLGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALSVEPVKGNLRLSGYSACGQDGGVQLPHEYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRKKVTEQVMDEKIGRTVTRVVLPHVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRSQGTEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINNSLEVAVDGIWKVCPWAGGHIQFPGFNGELICPAYHELCNTDPVVVSGQCPSACNFNGDCVDGRCHCFLGFHGHDCSRRSCPSNCTGNGMCLSSGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCRNVLGNDISGQHCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCEKDGDNRLRVCHSACQAYNLACGASLDCGDQTLFSGEGEGEGQCTGSGEMKLSWFNRLRNSFSLRNSSSKGISLRYRQF 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0147 861 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed11g0147 861 PRINTS Leishmanolysin (M8) metalloprotease family signature 402 431 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed11g0147 861 Pfam EGF-like domain 640 667 IPR013111 -
Aed11g0147 861 Gene3D Leishmanolysin domain 3 443 501 - -
Aed11g0147 861 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 2 832 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed11g0147 861 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 602 - -
Aed11g0147 861 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 2 832 - -
Aed11g0147 861 Gene3D Leishmanolysin domain 4 503 596 - -
Aed11g0147 861 ProSitePatterns EGF-like domain signature 2. 656 667 IPR000742 -
Aed11g0147 861 Gene3D - 116 304 - -
Aed11g0147 861 ProSitePatterns EGF-like domain signature 1. 656 667 IPR000742 -
Aed11g0147 861 Gene3D Leishmanolysin , domain 2 314 439 - -
Aed11g0147 861 Pfam Leishmanolysin 175 600 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aed11g0147 861 ProSiteProfiles EGF-like domain profile. 636 668 IPR000742 -
Aed11g0147 861 SMART egf_5 608 636 IPR000742 -
Aed11g0147 861 SMART egf_5 639 668 IPR000742 -
Aed11g0147 861 Gene3D - 597 639 - -
Aed11g0147 861 Gene3D Laminin 640 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0147 Aed-Chr11 1121847 1130872 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0147 11 1121847 1130872 Aed11g0147 11 1121847 1130872 ECH
Aed11g0147 11 1121847 1130872 Aed9g0318 9 2224865 2232500 PCT