Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0143 ATGGCCTCCGACGGAGCAACCTCGGCGGCGATGAGTCGGAGAAAGCCGTCGTGGAGAGAAAGAGAGAACAACAGAAGAAGAGAACGGAGGAGGAGAGCAATAGCGGCGAAAATATACACAGGACTTCGAGCTCAGGGGAACTACAACTTGCCAAAGCACTGCGACAACAACGAAGTTCTCAAAGCTCTTTGCGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACTTATCGCAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAGCTCTATGAGAAACATTCCTTTTTCTTATGCACAAAATCCAAGTCCTCTTTCTTCCTCGTTTCCCAGCCCAATTCCTTCATACCAAGTGAGCCCTTCCTCCTCCTCTTTCCCGAGCCCGTTTCGTTTAGACGGGGATAGGGACAGTGTAGCAAACCTCATTCCATACATTCGCAATGCGTCCTTGTCTCTTCCTCCTCTCAGGATTTCAAACAGTGCCCCTGTGACGCCACCTCTTTCATCACCAACATCTAGAAACCCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCAGCTTCTGCCCCTGCTAGCCCCACACACCGTCACCTTTACACCCCTGCCACAATTCCAGAATGTGATGAGTCTGATACTTCCACAGGCGAGTCTGTCCAGTGGGCGAAATTCCAAGCATTTGCTCCTTCTGCATCTGTGTGCCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCACATGGGGTGCCTGATAACGCAATCCAAGAGATGAGGATGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAATAATTCATGAAGTTGCATTGGATGATTTGGAGCTCACACTTGGAAGTGGGAAGGTGCGAACTACATCATCCAGTTTTTGCTGGTGCAAGCAGTTTATCTGGAAGAGACTAGAGAGTTATTATTGGGAACTGGATTTATCAGATGTTGTGGGCATTTTATGCAGAAATTCATCTCATTCCATGCCTTGGGTAAAATTCAGAAATGAGAATTTCACCTCGTCCCTCATGATTAAATCAGCTATGCCTCCACTGATGAGGCCATGTGGCACTTTGGGGTGTTGTTCCCCGTCTGTGATGAGTTGTGCGGGAGAGGGGTTTCTTCGGAAAGAAATATAA 1206 0.4826 MASDGATSAAMSRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFSYAQNPSPLSSSFPSPIPSYQVSPSSSSFPSPFRLDGDRDSVANLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPATIPECDESDTSTGESVQWAKFQAFAPSASVCPTSPTFNLVKPVVPHGVPDNAIQEMRMSSEEFGVQVKPWVGEIIHEVALDDLELTLGSGKVRTTSSSFCWCKQFIWKRLESYYWELDLSDVVGILCRNSSHSMPWVKFRNENFTSSLMIKSAMPPLMRPCGTLGCCSPSVMSCAGEGFLRKEI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0143 401 MobiDBLite consensus disorder prediction 14 29 - -
Aed11g0143 401 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 147 IPR008540 -
Aed11g0143 401 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Aed11g0143 401 MobiDBLite consensus disorder prediction 162 181 - -
Aed11g0143 401 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 310 - -
Aed11g0143 401 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0143 Aed-Chr11 1082309 1084884 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aed11g0143 BES1_N 1e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0143 11 1082309 1084884 Aed11g0143 11 1082309 1084884 ECH
Aed11g0143 11 1082309 1084884 Aed9g0313 9 2191123 2193495 PCT