Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0140 ATGGCTGCTCACTTGCCCAGGGTAGTTGTTGGTGAATCCTATTTAGATAACCCGGGCTTGAAGGGTAGTCATCGTTTGCTTTCAACCATGAAAAGCAGTAGTATATGTTTAAGCACGAGTTTGAGGAATGGTGGAAAAGTGAGCATGAGTTTGAAAAACCATCAGCAGCAGCCAGATAACAGTGAGATTTATGGATATTTTATTTATAATGCTGTCAAGACCTGGTGTAATTCTCATCCTTACATGCAGTCAGGGTCTGGAGATTTCCATACTTTGTCAAGCTCGTGTAACTCTGTTGGGCCTGCTCATGATGTGCCTTTTGACACTTCCGTTCGTGAGGAACAGTTAAGCACTTCTGCTGATTCATCTGACCGGAAAACTCCTTCAGGCAAGACCCTCAAGTTAATATCAGGATCATGCTACTTGCCTCATCCCGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAAGCAATAGGAGTGGCGGACGGTGTTGGTGGCTGGGCAGATCTTGGTGTTAATGCTGGATATTACTCTCGTGAGCTCATGTCCAAATCAGTGGAAGCTATTCAGGAGGAGCCTAAAGGTTCAATTGATCCAGCTAGGGTGCTGGAAAAAGCACACTCAAGTACAAGAGCCAGGGGTTCCTCTACAGCATGCATCATTGCACTTACTGATCAGGGCCTTAATGCTATCAATTTGGGAGACAGTGGGTTTATGGTGGTGCGAGATGGGTGCACCATATTCCGGTCCCCAGTGCAGCAACATGATTTCAATTTCACCTTTCAGCTGGAATGTGGCAGTAATGGTGATTTACCTAGTTCTGGTCAGGTTTTTACCATAGGCGTTGCACCTGGTGATGTCATAGTTGCCGGTACGGATGGGCTGTTTGATAACTTGTACAATAATGAGATTACAGCGGTGGTGGTTCATGCCATGAGAGCCGGATTAAGCCCTCAGGTGACAGCCCAGAAGATAGCTGCACTGGCACGTCAACGGGCACTGGATAAAGACAGGCAGACTCCTTTCTCAACTGCTGCTCAAGATGCTGGCTTCCGTTACTATGGTGGCAAGCTTGATGATACAACAGTTGTAGTTTCATATATTACTGGCTCTGGTGATGCATAA 1146 0.4581 MAAHLPRVVVGESYLDNPGLKGSHRLLSTMKSSSICLSTSLRNGGKVSMSLKNHQQQPDNSEIYGYFIYNAVKTWCNSHPYMQSGSGDFHTLSSSCNSVGPAHDVPFDTSVREEQLSTSADSSDRKTPSGKTLKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMSKSVEAIQEEPKGSIDPARVLEKAHSSTRARGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTIFRSPVQQHDFNFTFQLECGSNGDLPSSGQVFTIGVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSGDA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0140 381 ProSiteProfiles PPM-type phosphatase domain profile. 136 375 IPR001932 -
Aed11g0140 381 SUPERFAMILY PP2C-like 140 373 IPR036457 -
Aed11g0140 381 Pfam Stage II sporulation protein E (SpoIIE) 164 373 IPR001932 -
Aed11g0140 381 SMART PP2C_4 126 373 IPR001932 -
Aed11g0140 381 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR039123 -
Aed11g0140 381 MobiDBLite consensus disorder prediction 112 131 - -
Aed11g0140 381 Gene3D - 278 378 IPR036457 -
Aed11g0140 381 PANTHER PROTEIN PHOSPHATASE 1 380 - -
Aed11g0140 381 Gene3D - 145 271 IPR036457 -
Aed11g0140 381 SMART PP2C_SIG_2 148 375 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0140 Aed-Chr11 1058452 1063384 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0140 11 1058452 1063384 Aed11g0140 11 1058452 1063384 ECH