Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0121 ATGCCGATGTCAATATCATTATCCCCAGTTCCCGCGCGTCTCACACTCCTGGCTCTGTTCTCCGCCACCACCTTCTACTGCCTCTACAAATCTCGCCGCTTAAGAAATCTCAAACTCAAACTCTCGCTAACCCCTAACCCTAACCCTAAACCTAAGATTCTCTTCCTCTCCGAAACCGGAACCGCCAAAACCCTCGCGCGCCGCCTCCACAGCCTCCTCGCCTCAAACGACGTCGCATTCGACCTCGTCGATTCGCAGCAATACGAGCCAGAGGACCTCCCCAAGGAGACGCTCATCCTTCTCGTCGCCTCCACGTGGCAAGACGGCGCTCCCCCCGCCGCCTCCCGCTTCTTCGCCTCATGGCTCGCCGACGCCGCCGAAGACTTCCGCGCCGGCTCCCTCCTCCTCTCCCGCTGCCGCTTCGCCGTATTCGGCGTCGGCAGCCGAGTCTACGCCGATTCCTTCAACGCCGTCGCGAAAAACCTCGCCAAGCACTTGAGGGCGCTCGGCGCCAAGGAGGCCGTTCCGCTTGGAGAAGGAGATGTTGACGGTGGCGACGTGGACGCGGTTTTTGATCGGTGGTGTGAGAAGGTGGTTGCGGTTTTGAAGGGTGGCGGTGTTGTGGAAAGCTGCGATAATGATAATGCCGAGGAATGCAGCGACGTTTCGAGTTCCGAAGAGGAGTCTGATGAGGAGAGTAGTGAGATTGTTGATCTTGAGGACATTGCTGGTAAAGCTCCTTCGGGGCGGAAACCTGTGGCTAATGGAGACGAGAGCAATGGGAAGTTGAATGGCAAAAAAGAAATGGTTACTCCAGCGATTCGAGCGAATTTAGTGAAGCAGGGGTATAAAATTATTGGGTCGCATAGTGGTGTCAAGCTTTGTAGATGGACCAAGGCACAGCTTCGAGGTCGAGGTGGTTGCTATAAGCACTCATTTTATGGAATTGAGAGTCACAGATGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAGTGGCAGATGGATGATCCGATAGAGATTGTAAATTCTGCAATAGGCCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACCTCGGAGCGATTAACTGAAGGTCTCACACCACGTCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGAGATAAATGCACTTGTGGATGAGCTGCACAAAAGGAGGATTTCCACTTTTCTAGTTACAAATGCACAATTTCCTGAGAAAATTAAGTCACTGAAACCTATCACCCAGGATTCCTTGACTGCTCTAAAGGAAAAACATCAGCGAACTGTATACCGCCTGACCCTGGTGAAAGGTTGGAATACTGAAGATGTTGATGCTTATTCTAAGTTCTTTAGTTTAGGAGAACCTGACTTTGTTGAAATCAAAGGAGTTACATATTGTGGCTCGTCCACTACGTCAAAATTGACAATGGAGAATGTCCCTTGGCATACTGATGTGAAAGCTTTTTCTGAGGCCCTAGCTTTGAAAAGCCAAGGAGAGTATGAAGTCGCATGTGAGCATGCTCACTCGTGTTGTGTCCTCTTAGCAAAAACTAATAAGTTCAAAATTGATGGCCAGTGGCATACATGGATAGACTATGAAAAATTTCATGATCTGGTGGGTATGAGTCCGACTGTTCTTTTGGACCAAATTTGGATTATTGTTTTGTTTATGAATTTAGCCTCAATTTATTTTCAGGTTGCATCTGGAAGAACTTTTGACAGCAGAGATTACATGACTGCCACACCATCGTGGGCCGTCTATGGATCAGAGGAAAGTGGATTTGATCCAGGGCAATTGAGATACAGGAAAGAGAGACATCACAAGTCTACCCGCAATCAAGCAGGTTAG 1929 0.4863 MPMSISLSPVPARLTLLALFSATTFYCLYKSRRLRNLKLKLSLTPNPNPKPKILFLSETGTAKTLARRLHSLLASNDVAFDLVDSQQYEPEDLPKETLILLVASTWQDGAPPAASRFFASWLADAAEDFRAGSLLLSRCRFAVFGVGSRVYADSFNAVAKNLAKHLRALGAKEAVPLGEGDVDGGDVDAVFDRWCEKVVAVLKGGGVVESCDNDNAEECSDVSSSEEESDEESSEIVDLEDIAGKAPSGRKPVANGDESNGKLNGKKEMVTPAIRANLVKQGYKIIGSHSGVKLCRWTKAQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWQMDDPIEIVNSAIGLHTNMIKQMKGVPGVTSERLTEGLTPRHCALSLVGEPIMYPEINALVDELHKRRISTFLVTNAQFPEKIKSLKPITQDSLTALKEKHQRTVYRLTLVKGWNTEDVDAYSKFFSLGEPDFVEIKGVTYCGSSTTSKLTMENVPWHTDVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTNKFKIDGQWHTWIDYEKFHDLVGMSPTVLLDQIWIIVLFMNLASIYFQVASGRTFDSRDYMTATPSWAVYGSEESGFDPGQLRYRKERHHKSTRNQAG 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0121 642 SFLD Radical SAM 326 444 IPR007197 GO:0003824|GO:0051536
Aed11g0121 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 443 636 - -
Aed11g0121 642 PRINTS Flavodoxin signature 52 65 IPR001094 GO:0010181
Aed11g0121 642 PRINTS Flavodoxin signature 163 182 IPR001094 GO:0010181
Aed11g0121 642 PRINTS Flavodoxin signature 138 148 IPR001094 GO:0010181
Aed11g0121 642 PRINTS Flavodoxin signature 100 111 IPR001094 GO:0010181
Aed11g0121 642 Pfam Flavodoxin 53 193 IPR008254 GO:0010181
Aed11g0121 642 SUPERFAMILY Radical SAM enzymes 327 478 - -
Aed11g0121 642 ProSiteProfiles Flavodoxin-like domain profile. 51 199 IPR008254 GO:0010181
Aed11g0121 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 443 636 IPR034556 GO:0008033|GO:0051539
Aed11g0121 642 Gene3D Aldolase class I 255 441 IPR013785 -
Aed11g0121 642 Gene3D Aldolase class I 442 556 IPR013785 -
Aed11g0121 642 MobiDBLite consensus disorder prediction 621 642 - -
Aed11g0121 642 MobiDBLite consensus disorder prediction 214 237 - -
Aed11g0121 642 SUPERFAMILY Flavoproteins 49 202 IPR029039 -
Aed11g0121 642 Pfam Wyosine base formation 480 543 IPR013917 -
Aed11g0121 642 Pfam Radical SAM superfamily 326 444 IPR007197 GO:0003824|GO:0051536
Aed11g0121 642 MobiDBLite consensus disorder prediction 213 267 - -
Aed11g0121 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 10 442 - -
Aed11g0121 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 10 442 IPR034556 GO:0008033|GO:0051539
Aed11g0121 642 Gene3D - 31 211 IPR029039 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0121 11 932009 936015 Aed11g0121 11 932009 936015 ECH