Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0116 ATGACAGTGACTACAGGAGAAGGAGGAGTTGAGATCCAACAGCAGAGGCAGCAGAGCAGCAGAATGGCGCTCCCAGATTTCCTCCAAAGCGTGAATCTAAAGTACGTGAAATTAGGTTACCACTACTTGATCTCTCACATCGTGACCCTATTCCTGATCCCTCTCATCCTCGTCACGCTAATCCAGGTTTCCCAAACCACCGACCTCGGCGACCTCTGGCTCCACCTCAAGTACAACCTCCTCACCATCCTCACCTGCTCCGCCGTCCTCGTCTTCGGTCTCACCCTCTACGCCGTCACCCGCCCCCGCCACGTCTTCCTCCTCGACTCCGCTTGCTTCCGCCCCGCCGACCACCTCAAGGCCCCCTTCCAAAGCTTCATGGAGCACTCCCGCCTCACCGGCGACTTCCATGACTCCTCCCTCGACTTCCAGCGCAAGATCCTCCAGCGCTCCGGCCTCGGGGAAGAGACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCTCAGCCCTCCATGGCCGCTGCCAGGGCTGAGGCGGAACAAGTCATGTTTGGTGCTCTTGATAACCTCTTCCAGAGCACCAACATCAAACCAAAGGATATCGGTATCCTTGTTGTCAATTGCAGCCTTTTTAATCCCACCCCCTCGCTATCTGCCATGATTGTTAACAAGTACAAACTTAGGGGTAACATTAGGAGCTTCAATCTGGGAGGGATGGGGTGCAGTGCTGGTGTCATTGCTCTTGATCTCGCTAAGGACCTTTTGCAGGTTCATAGAAACACTCACGCTGTGATTGTCAGCACTGAGAACATCACTCAGAATTGGTACTTTGGGAACAATAAATCTATGCTTATTCCCAATTGCCTCTTCCGCGTCGGCTGCTCTGCTTTGTTGCTCTCCAACAAGCCGGCGGATCGAAGGCGGGCTAAATACAGGCTTCTCCATGTCGTGAGGACTCACCGCGGCGCCGACGACAAGGCCTTCCGGTGTGTCTACCAGGAGCAGGACGACGTCGGGAAGACCGGCGTGTCGTTGTCGAAGGACTTGATGGCAATTGCCGGTGGAGCATTGAAGACCAACATCACCACGCTTGGCCCTCTCGTGCTCCCGATTAGCGAGCAGCTTCTCTTTTTCGTGACCCTTCTGATGAAGAAGCTGCTGAAGGCTGATGTGAAGCCTTACATACCAGATTTCAAGCTTGCTTTTGATCATTTCTGCATCCATGCCGGGGGCAGGGCTGTGATTGATGAGCTGGAGAAGAACCTTCAGCTTCTTCCGGAACATGTGGAGGCTTCTAGGATGACCCTTCATAGGTTTGGGAACACTTCATCAAGCTCAATTTGGTATGAGCTGGCTTACATTGAAGCCAAAGGGAGGATCAAGAAGGGTAACACGGTTTGGCAAATTGCATTTGGAAGTGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCTATGAGAAATGTAAGGCCTTCTCCCAATGGACCATGGGAAGATTGCATTCATAAGTATCCTGTGGAAATAGTCACATAG 1530 0.5275 MTVTTGEGGVEIQQQRQQSSRMALPDFLQSVNLKYVKLGYHYLISHIVTLFLIPLILVTLIQVSQTTDLGDLWLHLKYNLLTILTCSAVLVFGLTLYAVTRPRHVFLLDSACFRPADHLKAPFQSFMEHSRLTGDFHDSSLDFQRKILQRSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDNLFQSTNIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIALDLAKDLLQVHRNTHAVIVSTENITQNWYFGNNKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLLHVVRTHRGADDKAFRCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLLKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRIKKGNTVWQIAFGSGFKCNSAVWQAMRNVRPSPNGPWEDCIHKYPVEIVT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0116 509 CDD CHS_like 87 482 - -
Aed11g0116 509 PIRSF Very_long_ch_3-ktacl-CoA_syn 26 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed11g0116 509 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 402 483 IPR013747 -
Aed11g0116 509 PANTHER 3-KETOACYL-COA SYNTHASE 4 18 508 - -
Aed11g0116 509 Pfam FAE1/Type III polyketide synthase-like protein 97 386 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed11g0116 509 Gene3D - 121 484 IPR016039 GO:0016746
Aed11g0116 509 SUPERFAMILY Thiolase-like 91 309 IPR016039 GO:0016746
Aed11g0116 509 SUPERFAMILY Thiolase-like 314 483 IPR016039 GO:0016746
Aed11g0116 509 PANTHER 3-KETOACYL-COA SYNTHASE 18 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0116 Aed-Chr11 891573 893102 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0116 11 891573 893102 Aed11g0116 11 891573 893102 ECH