Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0112 ATGAGCTGGAGAACCCTAGCCTCCACTTCAAGACACACATTCAAGAGACTCAATGCAATCCTACGATCCCCTTCTTCATTCCACCCACGCGCCTCCTCCTCCCTCTTCCTCCACGCGCCTTCCTTCTCCACCACCACCACCTTCCACTCCCACCAACCCACCAACGCCCTCATCGACCCATATCTCCACGCTCCTCTGCAAAACGACGCCGTCAACGACGACGACGAAGCCACGAACGAGTTCCTCTCGCGATTCGTTTGGATAATGCGGAAGAAGGTGAAGGAAGCTTACCCGGACTCCGACAAGCCCACCGTCGACGGCATGCTTGTCGCGATCGTCGAGAGGGTCGTCTCGGAAATGGAAAGGGGCGCCATCGAAACCACGTCGTTTCGTTCCGCCGATTTCAGCGAGGACCTGTGGAGAACGGTGTGGGAGGTGAGCAATTTGGTGATGGAGGATATGAGCAAGGAGAGGAAGAAGGAGAAAATGAAAGGCTTCCTGCAGTGCGAGGAGGTTAAGGAAATGTGCAGATTCGCCGGCGAAGTCGGCATTCGCGGCGACTTGCTCAGGGAGCTTAGGTTCAAGTGGGCCCGTGAGAAGATGGAGGAGCATGAATTCTATGAGGGTTTGGAGAAATTGAGGAAAGAGGCACAAAGTGAAATTGGTGCTACTAAGGAGAAGGAGAAGGAGAAGGAGAAGATTGCTGTTGGACTTCCCAAGAGGAGAGGGAAGATAAGATACAAGATTTATGGGCTTGATCTCTCTGATCCCAAGTGGGCACAAGTGGCTCATAGGATCCATGAGGCAGAGCAAATGTTTTCGCTGCAGGACCTGAAGCCGATCACTGGTAAAGCAAAGATTGTCACCGCCAAGATTCTGTCATCGTCGAAGGAGGATGACGACGGTTTGCAAAGTCTGTTGGCCGAGTGGATGGAGCTTGTCCAACCCACCAGGGTGGAATGGATGGATTTGCTTGACAAATTGAAAGACCAGAATCCTGTTTTGTACTTGAAGGTGGCTGAAATGGTATTGACTGAAGATTCTTTCCAAACAAATTTATCTGACTACTCTAGGCTTATTGATATCTATGCTAAAGAGAACTGCTTTGATGATGTTGAGAGAATGCTAAAGAAGATGAAGGAAAATGGTATGCAGCCAGATGCTTCAATAGCCAGTACGTTAGTCCACATGTACTGCAAGGGGGGTGATCTTGCACGTGCAAACGAAGCATTTGAAGTCTTGATGGGCCTGGGCTTCCAACCAGATGTACAAGTCTACAGCTCAATGATCATGGCCTTTGTGAATAATGGCCAGCCTGCAATGGGCGAGAAATTGATGAGGGATATGGAGACCCGAGATATTAGACCCACAAAGGAAATATACATGGCATTGCTCCGTTCTTATTCTCAATTCGGTGATGCTATAGGAGCCGAACGAATTTCAACAACTATGCAGTTTGCAGGATTCCCGCAGAACATGGACATGGAGACATGCACCCTGCTTATCGAGGCACATGCACTTGTCGGTAACTCTGATGCAGCAAGAAACCATTTTAACTCCATGAAAAGATTTGGGCATAGGCCTGATGATAGGTGCACTGCAAGCATGATTTCAGCTTATGAGAAGAAAAACTACTTAGACAGTGCTTTAAATCTTCTACTGGAGTCAGAGAAGGATGGGTTTGAGCCTGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTGGGCAAGTTGCAGCTTGTTGACGAGGCTGAGCAGATTTTAGGCAAAATAGCTCTGCTGGGCGAGGCTCCTCCCTTTAAGCTTCAAGTGAGTCTGTGTGATATGTATGCAAGGGCTGGAAATGAGAAGAAGGCCCTTCAAATTCTTGGTGTTCTGGAAGCTAGGAAGAATGAATTAGGACAAGCTGAGTTTGAGAGAATTATAAGTGGACTTGTTGATGGTGGGTTTCAGAAGGATGCACAAAGAATATGTCGGATCATGGAGGCACAGGGTTTTGATGCATCAAGGGTTAAGTTTAAACTTTCTAAACCTGTCTCCAGAGCACCGAGTATGAGATAG 2061 0.4823 MSWRTLASTSRHTFKRLNAILRSPSSFHPRASSSLFLHAPSFSTTTTFHSHQPTNALIDPYLHAPLQNDAVNDDDEATNEFLSRFVWIMRKKVKEAYPDSDKPTVDGMLVAIVERVVSEMERGAIETTSFRSADFSEDLWRTVWEVSNLVMEDMSKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLEKLRKEAQSEIGATKEKEKEKEKIAVGLPKRRGKIRYKIYGLDLSDPKWAQVAHRIHEAEQMFSLQDLKPITGKAKIVTAKILSSSKEDDDGLQSLLAEWMELVQPTRVEWMDLLDKLKDQNPVLYLKVAEMVLTEDSFQTNLSDYSRLIDIYAKENCFDDVERMLKKMKENGMQPDASIASTLVHMYCKGGDLARANEAFEVLMGLGFQPDVQVYSSMIMAFVNNGQPAMGEKLMRDMETRDIRPTKEIYMALLRSYSQFGDAIGAERISTTMQFAGFPQNMDMETCTLLIEAHALVGNSDAARNHFNSMKRFGHRPDDRCTASMISAYEKKNYLDSALNLLLESEKDGFEPGVATYSVLVDWLGKLQLVDEAEQILGKIALLGEAPPFKLQVSLCDMYARAGNEKKALQILGVLEARKNELGQAEFERIISGLVDGGFQKDAQRICRIMEAQGFDASRVKFKLSKPVSRAPSMR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0112 686 Gene3D Tetratricopeptide repeat domain 492 594 IPR011990 GO:0005515
Aed11g0112 686 PANTHER OS07G0661900 PROTEIN 13 681 IPR044657 -
Aed11g0112 686 Coils Coil 207 230 - -
Aed11g0112 686 Gene3D Tetratricopeptide repeat domain 328 491 IPR011990 GO:0005515
Aed11g0112 686 TIGRFAM PPR: pentatricopeptide repeat domain 356 388 IPR002885 -
Aed11g0112 686 TIGRFAM PPR: pentatricopeptide repeat domain 425 457 IPR002885 -
Aed11g0112 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Aed11g0112 686 Pfam Pentacotripeptide-repeat region of PRORP 363 474 IPR033443 -
Aed11g0112 686 Pfam PPR repeat 535 561 IPR002885 -
Aed11g0112 686 Pfam PPR repeat 497 525 IPR002885 -
Aed11g0112 686 Pfam PPR repeat 567 591 IPR002885 -
Aed11g0112 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Aed11g0112 686 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 13 681 - -
Aed11g0112 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 387 421 IPR002885 -
Aed11g0112 686 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 422 456 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0112 Aed-Chr11 858944 861937 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0112 11 858944 861937 Aed11g0112 11 858944 861937 ECH