Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0097 ATGTCAGGGCCGCTTGATCGGTTCGCACGTCCCTGCTTTGAAGGGTTTTCTGGTCATGATGAAAGGAGGGAGAGGAAATCGGATTTTGAGAACTCAGAAGACGACAGACGAACGAGGATTGGTAGTTTGAAAAAGAAAGCAATCAATGCTTCAAGCAAGTTCAGGCATTCTCTTAGGAAGAAGAGCAGCAGGAGAAAAAGCGTGAGTCGAAGCAATTCGGTTTCCATTGAGGATGTTCGAGATGTTAAGGAGCTCCAAGCAGTGGATGCATTTCGACAGGCTCTTATTTTGGATAATTTGTTGCCACCAAGACATGATGACTATCACATGTTGTTGAGATTCTTGAAAGCAAGGAAATTTGATATTGAGAAAGCGAAGTACATGTGGGCCAACATGATCCAATGGAGGAAAGAATATGGTACTGATACAATTATGGAGGATTTTGAATTCAGTGAGTTGAATGAAGTCCTGCAGTACTATCCACATGGTTATCATGGTGTGGATAAGGAAGGAAAACCTATTTATATTGAGAGGTTAGGCAAAGTTGATCCCAATAGGCTTATGCAAGTGACTACCATAGAAAGGTATTTGAGATACCATGTTCAGGGTTTTGAGAAAACGTTTGCTGTTAAGTTTCCTGCATGTTCTATTGCCGCAAAGAGACATATAGACTCAAGTACAACCATTTTGGATGTTCATGGTGTGGGTTTCAAAAACCTAACCAAATCTGCACGGGAACTCATCATGCGGCTGCAGAAAATTGATGGTGATTATTATCCAGAGACATTATGTCGAATGTTTATAATCAATGCTGGTCCTGGTTTTAAGCTGCTTTGGAACACAGTGAAATCATTTCTTGATCCAAAAACTACTTCAAAGATAAATGTTCTTGGAAACAAGTTCCAGAACAAATTACTTGAAATTATTGATGCAAGTTACGTTGTGTGCATGCAGATGGTTCTTAGTGGTGAAGTGCAATGTTCTAGACAAATAGTAACGGTTTCAAATGATGAGGGGACCGTGATTGAATGTGATAAGGCATCATTTCCAATGCCAATAAGAAGTAGTGATACATCAACAGCAGAATCAGGATCCGAAGTCGAAGATATCACTTCTCCCAAAGCAAGTGGAAATTATACAAACCCTCGGCTAACTCCTGTCCATGAAGAAGCAAGATTAATTGGTAGGGCCAGTAATGCTTGTGGTTTCTCAGAGTATGATGAGTATGTTCCCATGGTTGACAAGGCTGTTGACCTTGGGTGGAATGAGAAACAAGTAGCAACTCAAAACTTATATGGCTCAACAGAAAAATTCCTATTGAGGACTGGAAAATCTGGTGGTGCAAAGTGTGCATATATCTGGGCTATTATATTGGGCTTCTTTGTTGCCATCTTTACTATTGCTCGCTCACTAGCACTTCGTGTGACTAAGGGAATAAAGGACACTAAATCTGATTCTGCCAAAACTATGCCTAACAAGACTGTTGATTCAATAACCAAGGAAGAATCTCGTCCCCCATCACCGGTTCCCAGATTAACAAAGACAGAACTCATCTCATCTGCTTTGAAACGCCTCGGTGAGCTTGAAGAGAAAGTTGACATGCTACAGTCAAAACCTAATGTGATGCCATTTGAGAAAGAGGAGCTGCTGAATGCTGCTGTTTATCGTGTGGATGCATTGGAAGCGGAACTGATCGCTACAAAGAAGGCTTTATATGAAGCTTTGATTAGACAAGAAGAACTTCTGGCATACATCGATGGTCGGGAAAGAAGCAAATTCGAGTATGGCCAATCTTTTTGTAAAGCAGAAGAAGAAGTTTTGCTGTTGAAGAGATAA 1836 0.4074 MSGPLDRFARPCFEGFSGHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKSVSRSNSVSIEDVRDVKELQAVDAFRQALILDNLLPPRHDDYHMLLRFLKARKFDIEKAKYMWANMIQWRKEYGTDTIMEDFEFSELNEVLQYYPHGYHGVDKEGKPIYIERLGKVDPNRLMQVTTIERYLRYHVQGFEKTFAVKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVKSFLDPKTTSKINVLGNKFQNKLLEIIDASYVVCMQMVLSGEVQCSRQIVTVSNDEGTVIECDKASFPMPIRSSDTSTAESGSEVEDITSPKASGNYTNPRLTPVHEEARLIGRASNACGFSEYDEYVPMVDKAVDLGWNEKQVATQNLYGSTEKFLLRTGKSGGAKCAYIWAIILGFFVAIFTIARSLALRVTKGIKDTKSDSAKTMPNKTVDSITKEESRPPSPVPRLTKTELISSALKRLGELEEKVDMLQSKPNVMPFEKEELLNAAVYRVDALEAELIATKKALYEALIRQEELLAYIDGRERSKFEYGQSFCKAEEEVLLLKR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0097 611 MobiDBLite consensus disorder prediction 13 42 - -
Aed11g0097 611 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Aed11g0097 611 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Aed11g0097 611 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Aed11g0097 611 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 313 - -
Aed11g0097 611 MobiDBLite consensus disorder prediction 1 42 - -
Aed11g0097 611 Pfam CRAL/TRIO, N-terminal domain 106 131 IPR011074 -
Aed11g0097 611 SMART sec14_4 152 326 IPR001251 -
Aed11g0097 611 MobiDBLite consensus disorder prediction 483 510 - -
Aed11g0097 611 Gene3D - 75 139 - -
Aed11g0097 611 Gene3D - 140 339 IPR036865 -
Aed11g0097 611 SUPERFAMILY CRAL/TRIO domain 152 314 IPR036865 -
Aed11g0097 611 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 329 IPR001251 -
Aed11g0097 611 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Aed11g0097 611 Pfam CRAL/TRIO domain 158 314 IPR001251 -
Aed11g0097 611 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 313 - -
Aed11g0097 611 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 317 594 - -
Aed11g0097 611 Coils Coil 518 538 - -
Aed11g0097 611 CDD SEC14 153 314 IPR001251 -
Aed11g0097 611 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 317 594 - -
Aed11g0097 611 MobiDBLite consensus disorder prediction 353 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0097 Aed-Chr11 775936 780318 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0097 11 775936 780318 Aed11g0097 11 775936 780318 ECH