Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0087 ATGCCTTTCATCAAACTCACTCTTCTTGTTATGCTAATGATAAGTTTCCTCTCATCAGTTAAACTTTCCCTGGCTCACCCTGTTGGCTTCCATTTTGGGAGGGGTGGTCATCATGGGGGAATATCTTTTGGCCTTTCACCTGAATTCTATCAGTTCTCATGTCCTCAAGCTAATGACATTGTCATGTCAGTGTTGGATAAGGCCATTGCAAAGGACATGAGAATTGCTGCTTCTCTACTTAGACTTCACTTTCACGATTGCTTTGTGCAGGGCTGCGATGCATCGATTTTGTTGGATGATAGCGCAAGAATAGTGAGTGAAAAAAATTCAGGACCTAACAAAAATTCTGTCCGAGGTTTCGAAGTGATTGATAAGATAAAGTCTAAGTTGGAAGAAGCATGTCCTCTAACTGTGTCCTGTGCAGACATTCTTGCCCTTGCTGCCAGGGGATCCTCTCTTCTTGTAAGTGCGCATACCATAGGGGTGGCAAGATGTGGCACATTCAAGCAGAGACTATACAACCAAAATGGAAGAAACCAACCGGATGAGAATCTAGAAAAATCATTTTACTTTGATTTGAAGACAATGTGCCCAAAATCAGGTGGTGACAACTTCATTACTCCCTTGGACTTTGGGTCCCCAAGGATGTTTGATAATACATATTTCAAGCTCATACTTAGGGGGAAAGGACTGCTTAATTCAGATGAAGTGCTTCTTATGGGAAATGTTAAGGAAACTCGTGAATTGGTCAAGAAATATGCACAAGATGAGAGCCTCTTCTTTGAGCAATTTGCCATGTCCATGATCAAGATGGGGAATCTACGTCCTCTCATTGGATTTAATGGTGAAGTTAGGAAGAATTGTCGCCGTGTTAATTAA 879 0.4164 MPFIKLTLLVMLMISFLSSVKLSLAHPVGFHFGRGGHHGGISFGLSPEFYQFSCPQANDIVMSVLDKAIAKDMRIAASLLRLHFHDCFVQGCDASILLDDSARIVSEKNSGPNKNSVRGFEVIDKIKSKLEEACPLTVSCADILALAARGSSLLVSAHTIGVARCGTFKQRLYNQNGRNQPDENLEKSFYFDLKTMCPKSGGDNFITPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLMGNVKETRELVKKYAQDESLFFEQFAMSMIKMGNLRPLIGFNGEVRKNCRRVN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0087 292 Gene3D - 48 154 - -
Aed11g0087 292 PANTHER PEROXIDASE 9 46 155 - -
Aed11g0087 292 Gene3D Peroxidase, domain 2 155 271 - -
Aed11g0087 292 ProSiteProfiles Plant heme peroxidase family profile. 44 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 Pfam Peroxidase 154 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 Pfam Peroxidase 63 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PANTHER PEROXIDASE 9 154 291 - -
Aed11g0087 292 PANTHER PEROXIDASE 72-RELATED 46 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 SUPERFAMILY Heme-dependent peroxidases 44 292 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PANTHER PEROXIDASE 72-RELATED 154 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 Gene3D - 272 292 - -
Aed11g0087 292 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0087 292 CDD secretory_peroxidase 44 291 IPR033905 GO:0004601|GO:0042744
Aed11g0087 292 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0087 Aed-Chr11 714293 715983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0087 8 292 Peroxidase AT1G44970 58.065 4.19e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0087 K00430 - gmx:100795020 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0087 11 714293 715983 Aed11g0087 11 714293 715983 ECH