Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0086 ATGAGTGGAACATTCCTCTACGGTTTGGTTAATCATCCATCATCACCACCGATTCAGATTCAACAACGCTATCATTCTTTGTCACCACCAATTCCTCCTATTCGCCCCTTATGCATATCCCCTCTCACTCTCACCACCTCCGTTCTCCAACGCGATTCTTCCGCACTTGAACTCTCCATTGACTCCAACGACACCGTTTCACCGCAAAACGGAACGCTTCAGATGGAGACAACAGAGGAAGAAGCGCTTCCCATTCCGTCACTCCCTGCCGCCGAAGCAACAACCAGGCTTCGGAAGAAGAAAGAACTAGAAGACGACGTCGCTTCAGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTGGGCGTTGAGCGCAAGAACGATGTTCAGGATTTTGGTATCGAAGAATCTCTCAGCGAATTGGCGCAGCTAGCTGACACTGCTGGACTATTGGTTGTTGGCTCTACTTACCAGAATGCGATTCATGCATTGGGCATTGAAACGGTTGTCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAAAAGATTTTTGGTGGAGATGTGAGAGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGTCTCATCTTGAGCGTCAAGCAGGAGGGAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAAACTGTTAGGAAACATCGAAAGCAGTATCGTAACAGGCGTGTCTCAGTACCTGTGCCAGTGGTATCCTTGGTTGGTTACACGAATGCTGGTAAGAGTACACTTTTGAATCAACTAACTGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCAACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCCCTGGCTGAACAACAGATAAATGCAGTGGACAAAGTCCTGTCAGAACTAGATGTAACATTGATTCCAAAATTGATGGTCTGGAACAAGGTTGACAAAGTCAGTGATCCCCAGAAACTCAGGCTAGAAGCTGAAAAAAGAGATGATGTTGTATGCATATCTGCTTTAAGTGGTGATGGATTACAAGAATTTTGTAATGCTGTTCAAGACAAGCTAAAGGAATATACAGAACAAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGAATGCTTACACCCATGAGGCAACTGTGCGTATCGCGACCTTAA 1410 0.4489 MSGTFLYGLVNHPSSPPIQIQQRYHSLSPPIPPIRPLCISPLTLTTSVLQRDSSALELSIDSNDTVSPQNGTLQMETTEEEALPIPSLPAAEATTRLRKKKELEDDVASDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELAQLADTAGLLVVGSTYQNAIHALGIETVVFDDELSAGQLRNLEKIFGGDVRVSLAQMEYQLPRLTKMWSHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELETVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVTLIPKLMVWNKVDKVSDPQKLRLEAEKRDDVVCISALSGDGLQEFCNAVQDKLKEYTEQGTYIKAHVPLRFARMLTPMRQLCVSRP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0086 469 Gene3D - 273 446 IPR027417 -
Aed11g0086 469 Pfam 50S ribosome-binding GTPase 276 394 IPR006073 GO:0005525
Aed11g0086 469 CDD HflX 233 436 IPR030394 GO:0005525
Aed11g0086 469 TIGRFAM small_GTP: small GTP-binding protein domain 275 430 IPR005225 GO:0005525
Aed11g0086 469 Coils Coil 247 267 - -
Aed11g0086 469 Gene3D - 196 259 - -
Aed11g0086 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 441 IPR027417 -
Aed11g0086 469 Pfam GTP-binding GTPase Middle Region 198 268 IPR032305 -
Aed11g0086 469 PANTHER GTP-BINDING PROTEIN 6-RELATED 98 440 - -
Aed11g0086 469 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 274 440 IPR030394 GO:0005525
Aed11g0086 469 TIGRFAM GTP_HflX: GTP-binding protein HflX 197 435 IPR016496 GO:0005525
Aed11g0086 469 Hamap GTPase HflX [hflX]. 146 455 IPR016496 GO:0005525
Aed11g0086 469 PANTHER GTP-BINDING PROTEIN HFLX 98 440 IPR016496 GO:0005525
Aed11g0086 469 PRINTS GTP1/OBG GTP-binding protein family signature 276 296 IPR006073 GO:0005525
Aed11g0086 469 PRINTS GTP1/OBG GTP-binding protein family signature 343 361 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0086 Aed-Chr11 705976 712982 Dispersed