Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0084 ATGGAAACCAACTCAGTTTCCAAGCTTCTGTTACTTGTCTTCTTCACTGTTTTCTTTCTAGCTTCTGAGTTGATCCATTGCAGTGTCACCTATGATAAGAAGGCCATTATCATCAATGGCCAAAGGAGAATCCTCATCTCTGGCTCCATTCACTATCCCAGAAGCACCCCTGAAATGTGGGAGGATCTAATTCAGAAAGCGAAAGATGGAGGCCTTGATGTCATAGACACTTATGTTTTCTGGAATGTTCATGAACCATCTCCTGGCAATTACAATTTTGAAGGGAGATACGATCTGGTACGGTTCATTAAGACAGTGCAGAGGGTGGGGCTCTATGTGCATCTTCGCATTGGACCTTATGTGTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGAATCAGCTTCAGAACAGATAATGGCCCTTTCAAGGCTGCAATGCAAGGTTTTACTCAGAAAATTGTTCAGATGATGAAGAATGAAAAGCTATTTCAGTCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAATGAGTATGGACCAGAAAGCAAGCAACTGGGAGGTGCTGGTCATGCATACACAAACTGGGCTGCAAAAATGGCTGTTGAATTGGGCACAGGTGTACCCTGGGTGATGTGCAAGCAAGATGATGCTCCAGATCCAGTGGGTTCATCCATTTCTTCTCAACAGATAAATACATGTAATGGATTTTATTGTGATTACTTCTCTCCAAATAAACCATACAAGCCTAACCTTTGGACTGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGTGGTCCAATTTACCAGCGACCGGTTCAGGATCTAGCATTTGCAGTTACTCGATTCATACAAAAGGGTGGTTCATATGTCAATTATTACATGGTTGGTTTGATCAGGGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATTAAGCAATGTGAACATGCTTTGGTTTCTTCAGACCCCACTGTTACATCATTGGGAGCGTATGAGCAGGTTCATGTGTTCTCTTCAAAAAATGGAGCATGTGCAGCTTTTCTAGCAAACTACCATTCGAATTCTGCTGCAAGAGTGAAGTTCAATAACAGGAACTATGAGTTGCCTCCTTGGTCCATAAGTATCCTCCCTGATTGTAAAACAGATGTATTCAACACTGCAAGAGTGAGGTTTCAAACTACACAGATACAAATGTTGCCTGGCAATTCTAGGTTGTTATCATGGGAGACCTATGATGAAGATGTATCTTCGCTAGCAGAAAGTTCCAAGATTACAGCTTCTGGACTATTAGAACAGATAAACACCACCAGAGACACTAGTGACTATCTATGTGTTGACATAAGTTCATCAGAATCCTTTCTTGGAGGAAGGAACAAGCCCAGCATTACTGTGCATTCTGCTGGCCATGCTGTCCATGTATTTGTTAATGGTCAATTTTCAGGCTCTGCTTTTGGGACAAGTGAAGACAGAAGTTGCACATTCAATGGCCCTGCCAACCTACGTGCTGGAACTAATAAAATAGCACTTCTCAGTGTAGCTGTTGGATTGCCCAATGTTGGATTCCATTTTGAAACATGGAAGGCTGGGATCACTGGAGTTTTGCTTCATGGACTTGACCACGGACAGAAAGATTTGACTTCACAGAAGTGGTCATACCAGATTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCTAATGAGGTCTCATCTGTTGATTGGGTGAGTGACTCACTAGCTGTCCGAAGCCAGTCACAGTTGCAATGGCACAAGGTAAGAATTGTCACTGGTTTTTGGTATCACGTGCCAAGATCATGGTTAAAACCAACAAATAACTTGGTAGTAGTATTTGAGGAATTGGGGGGGAATCCTTGGAAAATATCTCTGCTAAAAAGGACAATACATACTCCAGCAAACTAG 1950 0.4241 METNSVSKLLLLVFFTVFFLASELIHCSVTYDKKAIIINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQRVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESKQLGGAGHAYTNWAAKMAVELGTGVPWVMCKQDDAPDPVGSSISSQQINTCNGFYCDYFSPNKPYKPNLWTEAWSGWFTEFGGPIYQRPVQDLAFAVTRFIQKGGSYVNYYMVGLIREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGAYEQVHVFSSKNGACAAFLANYHSNSAARVKFNNRNYELPPWSISILPDCKTDVFNTARVRFQTTQIQMLPGNSRLLSWETYDEDVSSLAESSKITASGLLEQINTTRDTSDYLCVDISSSESFLGGRNKPSITVHSAGHAVHVFVNGQFSGSAFGTSEDRSCTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKAGITGVLLHGLDHGQKDLTSQKWSYQIGLKGEAMNLVSPNEVSSVDWVSDSLAVRSQSQLQWHKVRIVTGFWYHVPRSWLKPTNNLVVVFEELGGNPWKISLLKRTIHTPAN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE RELATED 606 648 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 Pfam Beta-sandwich domain in beta galactosidase 328 399 IPR041392 -
Aed11g0084 649 Gene3D Glycosidases 25 325 - -
Aed11g0084 649 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PRINTS Glycosyl hydrolase family 35 signature 259 274 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE RELATED 3 302 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE 304 602 - -
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE RELATED 304 602 IPR001944 GO:0004553|GO:0005975
Aed11g0084 649 SUPERFAMILY Galactose-binding domain-like 383 542 IPR008979 -
Aed11g0084 649 Pfam Glycosyl hydrolases family 35 36 303 IPR031330 -
Aed11g0084 649 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE 3 302 - -
Aed11g0084 649 PANTHER BETA-GALACTOSIDASE 606 648 - -
Aed11g0084 649 SUPERFAMILY (Trans)glycosidases 28 325 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0084 Aed-Chr11 686472 692084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0084 11 686472 692084 Aed11g1249 11 17666233 17672226 ECH
Aed11g0084 11 686472 692084 Aed11g0084 11 686472 692084 ECH
Aed11g0084 11 686472 692084 Aed9g0263 9 1876480 1880764 PCT