Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0081 ATGGTTTCTCTAATCTCACCACCACCTTCATCTTGCAGTTGCAACAATCAATTGCTGCTCGAAACTCGCTTCTTCTCCACTCTCTTCCTCCCACCAAGGAGCGTCCAATTCCACAACACACGCACCTCCGTAAATTACAAACGGAGAACGTTACGGTGCGGCGTTACCAGCGCCGACGCATCTCCTCCGGCGTCAACCTCGCTGGCGAAGGAGCCTCACAAATACTTCGACCACGCAATAATCACCGCTCGCGCGGGCGACGGAGGGCACGGCGCGGTGCTGAATCAGCCGGAGGAAGGAAAAACGAAGAAGAAAGGGAAAGGCTCGTTGAAGAGAGACTTCGACGGGTCCCTCATACTTCCCATGGGTGGCCACGGTGGTGACGTGGTGCTCTTCGCCGACGAGTCCAAAGACACGTTGCTCCAGTTTCACAACAAGAGCAGCAGCCGCTACCACGCTAAGCGCGGCGGCAACGTTGACGCCATGGGCGTTTTGACTTCGATGCTTCGCGATGGACTTGCTGCACCCACGCTGCGCATTCCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAAAGAGGGAAGATGTTGGCTGATCTAGCACAACCTGGTGATGAAGTTCTTGTTGCCAGGGGAGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCACAAAAGGAAAAAGATGATGGCTCTCACAACTAATGTTATGAGAGATGACTCGGACAAGGTTTTAATTCATGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCTGATGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACACTTCTAGCAGCCATTACACTTGCAAAACCAGATATTGCGGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCTGAAGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGCCGCAATTTTTTGAGACACCTCAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCTGCCACTGAGAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCCGAGTACCTTGAACGACCATACGTTGTAATTCTGAACAAGATTGACCTACCAGAGGCAAAGGACAGACTTCCATCATTGACTGAAGAAATTATGAGAATTGGCAACGACGGTGCTGCTTCCGAGCCAAAACCTAGTCCTGAAGATCCAGATGAAACTGACGGGAAGGAAAAAAGACTTGAAGACTATCCACGACCTCTCTCTGTTGTCGGAGTTAGTGTTCTAAAGGGTATCAAGATTAATGAATTGCTAAAGGAGATAAGGTCCGCCTTAAGGAAGTGCTCAGATTCCAATGAAGCATTGACTTTCAGTGTGTCACCTTGA 1458 0.489 MVSLISPPPSSCSCNNQLLLETRFFSTLFLPPRSVQFHNTRTSVNYKRRTLRCGVTSADASPPASTSLAKEPHKYFDHAIITARAGDGGHGAVLNQPEEGKTKKKGKGSLKRDFDGSLILPMGGHGGDVVLFADESKDTLLQFHNKSSSRYHAKRGGNVDAMGVLTSMLRDGLAAPTLRIPVPVGTVVKSKRGKMLADLAQPGDEVLVARGGQGGISLLEMPQHKRKKMMALTTNVMRDDSDKVLIHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYVVILNKIDLPEAKDRLPSLTEEIMRIGNDGAASEPKPSPEDPDETDGKEKRLEDYPRPLSVVGVSVLKGIKINELLKEIRSALRKCSDSNEALTFSVSP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0081 485 Pfam 50S ribosome-binding GTPase 265 392 IPR006073 GO:0005525
Aed11g0081 485 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 46 478 IPR045086 GO:0003924|GO:0005525
Aed11g0081 485 ProSiteProfiles Obg domain profile. 73 263 IPR006169 -
Aed11g0081 485 Coils Coil 458 478 - -
Aed11g0081 485 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 264 470 IPR031167 GO:0005525
Aed11g0081 485 ProSitePatterns GTP1/OBG family signature. 324 337 IPR006074 GO:0005525
Aed11g0081 485 PRINTS GTP1/OBG GTP-binding protein family signature 339 357 IPR006073 GO:0005525
Aed11g0081 485 PRINTS GTP1/OBG GTP-binding protein family signature 287 305 IPR006073 GO:0005525
Aed11g0081 485 PRINTS GTP1/OBG GTP-binding protein family signature 322 337 IPR006073 GO:0005525
Aed11g0081 485 PRINTS GTP1/OBG GTP-binding protein family signature 266 286 IPR006073 GO:0005525
Aed11g0081 485 Gene3D GTP1/OBG domain 74 262 IPR036726 -
Aed11g0081 485 CDD Obg 264 469 IPR031167 GO:0005525
Aed11g0081 485 Pfam GTP1/OBG 77 261 IPR006169 -
Aed11g0081 485 Gene3D - 263 478 IPR027417 -
Aed11g0081 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 265 470 IPR027417 -
Aed11g0081 485 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 46 478 - -
Aed11g0081 485 MobiDBLite consensus disorder prediction 422 440 - -
Aed11g0081 485 SUPERFAMILY Obg GTP-binding protein N-terminal domain 75 230 IPR036726 -
Aed11g0081 485 MobiDBLite consensus disorder prediction 413 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0081 Aed-Chr11 666691 675376 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0081 11 666691 675376 Aed11g0081 11 666691 675376 ECH