Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0080 ATGATAGGAAAGGTGAAGAAAGCTGCACAAGCGAGTTCGAGAAAGGGGTGTATGAGAGGCAAAGGTGGCCCTGAGAATGCTAGTTGCACCTACAAGGGTGTGAGGCAAAGGACCTGGGGGAAATGGGTTGCTGAAATCCGTGAACCTAACCGTGGTGCACGCCTCTGGCTTGGGACCTTTGAGACCTCTCTTGAGGCTGCCGTGGCCTATGATGCTGCTGCAAGAAAGCTCTATGGAGATGATGCAAAACTCAACCTTCCTGAACTCGCTGCACCTGCACCTCCACCCGCACCTGCACCTCCTGCAGTAGTCAATTCACCATCACCACCACCACCACCAATTCCTTCTCAGATCCACCACATGCACCACCCTGCACCAGTGGTTCACCCAACCTATGACCTTGTCAATGTCACTTCTTCTGGTTTTTTCAATAACAACACTGTGGTCTCCATGCCTTCTTATCAGTTTATGGACTCAACACCAGTGTATACCAATTGCGACTCTTTTGTCTCTTTTCCATCTGAGATCACCAACACCATCACCACTGTGCCGGTGCCAATGGAGAATTACTCCTCCTACTCCTATTCCTCCATCGATTTCACTGCAGAGGAGAGCAGCGTGGATTCTTGCTTCTGGGGGCCCAAAATGAATGACGAAGATGATACTCTCATGCCTGCGTATGATGATGAATCCATTTGGACTGATGCTGCTATGTCTGTTGAATTTTCTCTTATTACAGATGATGGATTTTATGGTGCTGGGAACAACAACAACAACAATGGAAACTCTGCTGGTGGTAATTTCCCTAATGGAAACTTCCCTAATGGAAACTTTGCTGATGGAAAATTTGGTGGTGGTGGTGAGAATTTCTCTGACGAAGTTGGTGGTGATGATGGTTGGTGCACATAA 909 0.4785 MIGKVKKAAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSLEAAVAYDAAARKLYGDDAKLNLPELAAPAPPPAPAPPAVVNSPSPPPPPIPSQIHHMHHPAPVVHPTYDLVNVTSSGFFNNNTVVSMPSYQFMDSTPVYTNCDSFVSFPSEITNTITTVPVPMENYSSYSYSSIDFTAEESSVDSCFWGPKMNDEDDTLMPAYDDESIWTDAAMSVEFSLITDDGFYGAGNNNNNNGNSAGGNFPNGNFPNGNFADGKFGGGGENFSDEVGGDDGWCT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0080 302 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Aed11g0080 302 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 4 251 - -
Aed11g0080 302 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Aed11g0080 302 MobiDBLite consensus disorder prediction 89 119 - -
Aed11g0080 302 MobiDBLite consensus disorder prediction 282 302 - -
Aed11g0080 302 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Aed11g0080 302 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 251 - -
Aed11g0080 302 MobiDBLite consensus disorder prediction 1 27 - -
Aed11g0080 302 MobiDBLite consensus disorder prediction 89 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0080 Aed-Chr11 663983 664891 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed11g0080 AP2 2.6e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0080 11 663983 664891 Aed11g0080 11 663983 664891 ECH
Aed11g0080 11 663983 664891 Aed9g0258 9 1854408 1855148 PCT