Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0074 ATGGCTCGCTGCTACACCTTGTTCTTGTCTTTCCTCCTCTTCGCCGCCGTGGCCACCGCCGCGGTGGCCACGGCCGATGCCGAAGACATCCTGATCCGTCAGGTGGTGCCGGAAGCCGGCGAGGCCAAGGAGGAGAACCACCTTCTGAACGCGGAGCACCACTTCGCGAGCTTCAAGGCCAAGTTCGGGAAGACCTACGCCACCGAGGAAGAGCACGACCATCGCTTCGGCGTCTTCAAGTCAAACCTCCGCAGAGCGAGGCTGCATGCCAAACTCGACCCCTCCGCCGAACACGGCGTCACAAAATTCTCCGATCTGACTCCGGCAGAGTTCCGGAGCCAGTTCCTCGGCCTTAAGCCGCTCCGGCTCCCGGCGAACGCTCAGAAGGCACCGATCCTTCCCACCAAGAATCTCCCCAAGGATTTCGATTGGCGAGACAAAGGAGCCGTCACTAACGTCAAGGACCAAGGTTCGTGTGGTTCGTGTTGGGCTTTCAGCACCACGGGAGCGTTGGAAGGAGCTCACTTTCTGACTACTGGTGAGCTCGTGAGCCTTAGCGAGCAACAGCTTGTGGATTGCGATCACGTGTGTGATCCAGAAGAGTATGGAGCGTGTGACTCGGGCTGTAATGGTGGGTTGATGAACAATGCATTTGAGTACATACTTCAGTCTGGGGGAGTACAGAAAGAAAAGGACTATCCATACACTGGAAGAGATGATACCTGCAAATTTGACAAAACCAAAATTGCAGCTTCTGTATCTAATTACAGTGTGGTTTCCCTTGATGAAGAACAAATTGCTGCAAACCTAGTGAAGAATGGCCCTCTTGCAGTTGCTATCAATGCAGTTTTTATGCAGACATATGTAGGTGGTGTCTCATGCCCATACATATGTGGGAAGCATTTGGATCATGGGGTTCTTCTAGTGGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGAATAAGCCTTACTGGATCATTAAGAATTCATGGGGGGGAAGCTGGGGAGAGGATGGATATTACAAGATCTGCAGAGGTCGAAACGTGTGTGGAGTGGATTCCATGGTCTCAACTGTAGCTGCTATACATACATCCAGCCATTAA 1110 0.5216 MARCYTLFLSFLLFAAVATAAVATADAEDILIRQVVPEAGEAKEENHLLNAEHHFASFKAKFGKTYATEEEHDHRFGVFKSNLRRARLHAKLDPSAEHGVTKFSDLTPAEFRSQFLGLKPLRLPANAQKAPILPTKNLPKDFDWRDKGAVTNVKDQGSCGSCWAFSTTGALEGAHFLTTGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDDTCKFDKTKIAASVSNYSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGGSWGEDGYYKICRGRNVCGVDSMVSTVAAIHTSSH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0074 369 SUPERFAMILY Cysteine proteinases 52 361 IPR038765 -
Aed11g0074 369 Pfam Papain family cysteine protease 138 360 IPR000668 GO:0006508|GO:0008234
Aed11g0074 369 Gene3D Cysteine proteinases 26 362 - -
Aed11g0074 369 CDD Peptidase_C1A 139 361 IPR039417 -
Aed11g0074 369 SMART Inhibitor_I29_2 55 111 IPR013201 -
Aed11g0074 369 Pfam Cathepsin propeptide inhibitor domain (I29) 55 111 IPR013201 -
Aed11g0074 369 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 37 363 - -
Aed11g0074 369 SMART pept_c1 138 362 IPR000668 GO:0006508|GO:0008234
Aed11g0074 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 302 312 IPR025660 -
Aed11g0074 369 PRINTS Papain cysteine protease (C1) family signature 326 332 IPR000668 GO:0006508|GO:0008234
Aed11g0074 369 PRINTS Papain cysteine protease (C1) family signature 304 314 IPR000668 GO:0006508|GO:0008234
Aed11g0074 369 PRINTS Papain cysteine protease (C1) family signature 156 171 IPR000668 GO:0006508|GO:0008234
Aed11g0074 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 156 167 IPR000169 -
Aed11g0074 369 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 326 345 IPR025661 -
Aed11g0074 369 PANTHER CYSTEINE PROTEASE RD19C-RELATED 37 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0074 Aed-Chr11 614340 616852 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0074 11 614340 616852 Aed11g0074 11 614340 616852 ECH
Aed11g0074 11 614340 616852 Aed9g0253 9 1819846 1821218 PCT