Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0068 ATGGAGGGAGAGGATATTAGGTCTGGGACCAAGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGGTCTATCTTCAAGCTGAAGAGGTCTAAGAAGAAGGGTAGTGGTAGTGATGCTGCTGTTAGGGAGAAAGGGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGGTTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTTACAAGAGGTGCAAGTCCTGCTTTGCTGCATGTGTGTGATGAAGATTTGGTTGCTTTGGGACCTAAGGGTAAGGATGAGAAAGGGATGGTGTCCTTGGTTCCTGGTGATGAGGACATGCAGATGCAAGATTGTTCTGATCAACAGCACATAGAGGATTCGTTGTCCGCAATTTTCCATAAGGCACAGTCTAGTTCTACCAGGAAATCTCGTGTGGGTTTGAGGCCAAAAAGGGGGATTCAGAATGTGGATAGTGAAGGTTTTGTGGAAGCTGTGGATTCTGTTGTTGAAAGTAGATCTGGATCTGCTTCTGGCTCGAAATTGGTTAGGGGGAATGTCGTGTCTGCGGATGCTTTGCCTCAAGAGTCTGAACCGGTTGTTGCATCTGTGGTGGATGATCAGAAGTGTGGCGATGGCGGTTTTCAAGAGGAAACAGCAAAGGGTGATTTTGATTTGGACATTCCAGATGGACCATCTCAGTTGAACAATGTCTGCCATGTAGATAGGCAGCAATTGTCTTGTGTACAAGTTGAAGATATTTCTTGTCATTCTGACCACAAGGTTGCATTACAGGAAAGTGTTCTCAGTGATGGTTTAAATAAGTTATCTACCATGTCACATGATGAAATAGTTGATACTGTCCCTCTCTCAAAAGTGGGCGAAGGCGAAAGAGGATTTACTCAGGTAGGAGAGTCCGAGAACAGATTGATCGATGAACCAGCACTAGTGTGCAACAGTGCTTCAGAACCTGATGTTTCTACTTCGTCTGGGAAAGAAAATGCCTTAACTTCTTGCCACACTGAACCCTTGATTAAATCAACTGAAAATATATTGAACGAGAATAATAATAAGGTTGCTGCAAAAAAATTCCAGGAATCCTCAAGTAATGGAGCACTAAAGTTACCTGGATGCCATATGGAAGTAGATGGAGGTGGAAAATCAGAAACTGAGTTCGTTTCTGATAGAAATTTCTGTGATTATAGTAGTTTAGATACAAAGGCTGAAGTTCAAGATTTTGTTTTAGGTTTTTCACCTAAAAGAAATAATGTAACTATCAGTGGTAGTTTATCTTCTATGGTGTCTAATGAAGCCAATGAAACTTGCAATATTCCAAAAGACTCTACTGCTTCAATTCTTAAATGCAGCTCAGTGTTAGATCCAATTCAATCTGATGGATCCTCTCTTCAGTCTTCTATTCCAGATGAAAATGGGAACTCTGCAGAATACCGTGTCCTTGTGTCTGGTTTTGCTGATAACGAGGGTAAGATATCAAGCATTCCACGGTCGGTGCGAAAGGCCAAAATGCGTAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAGATTTTAATTGATGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGGTGACCGCACTCTTAGAACAAGAATGAAGCATGATTCCTCTTTGAATACTGGTGAAGACTCTGAAAATGTTGCAGTAGCAGCGGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATTGAGAAAATAAAGTTTAAGGAGATCTTGAAGCGCAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTAAGTCTTTGGAGCAGAGATGTCACACGTATTTTACCACTTGCTGAATGTGGAGTTAGTGATACTCATTCTGAGGATGGAAGTCATCGTTCTTCTATTATTAGGGAGGTCTATGCATTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCAAAAGGAGAATGTTGGAAGTAGTGCAAGACATTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGCTGACTCTGAAGATGAGGTTTCCTTTCTTGTTGGTCAGACCAAAATGTCAGATACTTCCAATGAGATTAACAATGACCTAACAAAAGATTGTGATGACCTATCAACTGAACCAGCAGAAGGCATGGGGCATGCTAATGAAGTGAAGGTGGATTTATCAAACATGATACAACAGGCAGAAAGAAAAAAAAATGATTACCAGGAAAATGAGGAGTTTCAGGATGGAACTATACATGTCCCTATTGACAGTTCCGTTCCTTCCTCCAACTTTCCTGATTGCGGATTGACTTCTCTGGTAGGTGATCATCTGCAGTCTGATTTAGATCCTAGGAAGAGAGTAATTGTCATTGGAGCTGGTCCTGCCGGGCTAACTGCTGCTCGCCACTTGCAACGTCAGGGATTTGCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTATTTACTGATCACTCATCACTTTCTGTCCCTGTTGATCTCGGTGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTGATTTGTGCTCAGCTGGGCCTTGAGTTGGCAGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGGACAAAAAGTTCCTGCAGATATGGATGAAGCACTGGAAGCTGAGTATAATAGTCTCATTGATGATATGGTATTGGTTGTTGCTCAGAAAGGTGAGCAAGCTATGAGAATGTCTCTTGAAGATGGTCTAGAATATGCTCTCAAGATTCGCCGAATGGCACGCTCTGAAAGTAGTGAAGAAACTGAACAAAATAATTCTGCAGATATTCCTATTGATTCCCAAAGGGACAGTACTGTGGAAAAAAAACTTGATGAGGAGATTTTGAGTCCGCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTTAAGGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGCTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTTGTTGAGTCTCTGGGAGAAGAACTTACAATTCACTTGAACCATGTCGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCCAGAGTAATAAAGTCCAAATTTCTACGTCAAATGGCAATGAGTTCTTTGGCAATGCTGTCCTTGTGACTGTTCCGCTTGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCACCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGTTTTGGAATTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGCTTGAGCTCTTCTGTTCATGTTAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGACTCAGTTCCTGATCCTGTTGCATATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTTCGTATTCTTACGTTGCTGTTGGAGCATCTGGAGAAGACTATGATCTATTAGGGAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAGGCAACCTGCAAAGAGCACCCAGATACTGTCGGTGGTGCAATGATGAGTGGACTACGGGAGGCTGTTCGCATAATTGACATATTGAGCACTGGAAATGATTACATTTCAGAGGTGGAGGCATTGGAAGCTGCTCGGGGACAGTTAGACACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTTGATGCATTAGAGCTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGGAGCTTTGTTAAGGGAAATGTTCCTTAATACGAAAACCACTGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTGGCCATTCTCAATTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTTTTGAGGCACTGTTTGCGTCTTCTTGTCCGTGTTTCCACTGATCTTCTTGCTGTACGATTATCAGGAATGGGAAAAACTGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAGCTTCTAATGGTGGATTGAAGATATCAAGACAAACAACTGCTGCAGATTTATCAAAGAGAAAATCTGTAAAAGATGCAGCCTTGGGAAAGCCACCTCTGAGCACATATCATGGTACCATTGAGAATAAAGGGGGCTTGCTGAATCCTACTTCTGCTGGAAGCAATTCACCTTCCACTGCACATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCAGCAGCGTATCACGAGGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGACCCAGCGGTTACTGAGAAGGAGGATAACATCTGCGTTATATCTGAAGAAGAACAGGCTGCTATAACTGCTGCAGAAGCTGCCCGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGTAATACACTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGTGAGCAGTCTTCACAAAACGATGAGTGTGATAGTAGAAAAAAATGGTCTGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGGGTTAGGGACTGGTCTGTTGATTTCTCTGCTGCTTGTGTCAACCTTGAAAATTCCAGAATGCCAGTTGATAACCTCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCCGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGCCTATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGACTATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCAACTATTCATTTGAAGGATGAGGAGGATTCAAATGCCTGTTCAAAGTTACCCAGCTGGAAGCGTGATGGTATTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAGTAAGGACGCCCAAAAAAGTCATTCGCGAGGAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTCATGGAGCAAGCCACAGATGCAGAAAAAGCCATGGCTGTTTGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATGTATTGATTGAGAGACACATGACAACAAAACCAGACATGAAATCTTAA 5535 0.4276 MEGEDIRSGTKKKRSKKEIGFDSDDDEPIGSIFKLKRSKKKGSGSDAAVREKGDLGGMDDNDTLASFRKRLKGPKRDQGSGVTRGASPALLHVCDEDLVALGPKGKDEKGMVSLVPGDEDMQMQDCSDQQHIEDSLSAIFHKAQSSSTRKSRVGLRPKRGIQNVDSEGFVEAVDSVVESRSGSASGSKLVRGNVVSADALPQESEPVVASVVDDQKCGDGGFQEETAKGDFDLDIPDGPSQLNNVCHVDRQQLSCVQVEDISCHSDHKVALQESVLSDGLNKLSTMSHDEIVDTVPLSKVGEGERGFTQVGESENRLIDEPALVCNSASEPDVSTSSGKENALTSCHTEPLIKSTENILNENNNKVAAKKFQESSSNGALKLPGCHMEVDGGGKSETEFVSDRNFCDYSSLDTKAEVQDFVLGFSPKRNNVTISGSLSSMVSNEANETCNIPKDSTASILKCSSVLDPIQSDGSSLQSSIPDENGNSAEYRVLVSGFADNEGKISSIPRSVRKAKMRKHGDMTYEGDADWEILIDDQALNESQVMTDGDRTLRTRMKHDSSLNTGEDSENVAVAAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVSDTHSEDGSHRSSIIREVYAFLDQYGYINVGIASQKENVGSSARHCYKLVKEKGFEESLAASMADSEDEVSFLVGQTKMSDTSNEINNDLTKDCDDLSTEPAEGMGHANEVKVDLSNMIQQAERKKNDYQENEEFQDGTIHVPIDSSVPSSNFPDCGLTSLVGDHLQSDLDPRKRVIVIGAGPAGLTAARHLQRQGFAVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELAVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMARSESSEETEQNNSADIPIDSQRDSTVEKKLDEEILSPQERRVMDWHFAHLEYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEELTIHLNHVVTNVSYGIKEPGQSNKVQISTSNGNEFFGNAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVVLEFPSVFWDDAVDYFGATAEERSSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSVHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPFSYGSYSYVAVGASGEDYDLLGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYISEVEALEAARGQLDTERDEVRDIIKRLDALELSNIMYKNSLDGAQILTRGALLREMFLNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKISRQTTAADLSKRKSVKDAALGKPPLSTYHGTIENKGGLLNPTSAGSNSPSTAHVKKLHSKQGRQPAAYHEVSSSRSKGSIDPAVTEKEDNICVISEEEQAAITAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQSSQNDECDSRKKWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLENSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSLYTKAWIDTAGGVAIKDYHAIERWQSQAAAADSYFSNPTIHLKDEEDSNACSKLPSWKRDGIANESSISQVTVSKDAQKSHSRGADHIKQAVVDYVMEQATDAEKAMAVCEFLDFKRKNKIRSFVDVLIERHMTTKPDMKS 1844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0068 1844 ProSiteProfiles SWIRM domain profile. 571 671 IPR007526 GO:0005515
Aed11g0068 1844 MobiDBLite consensus disorder prediction 1537 1551 - -
Aed11g0068 1844 MobiDBLite consensus disorder prediction 962 976 - -
Aed11g0068 1844 SUPERFAMILY FAD/NAD(P)-binding domain 804 1288 IPR036188 -
Aed11g0068 1844 Pfam Flavin containing amine oxidoreductase 816 1286 IPR002937 GO:0016491
Aed11g0068 1844 MobiDBLite consensus disorder prediction 1 77 - -
Aed11g0068 1844 SUPERFAMILY Homeodomain-like 569 666 IPR009057 -
Aed11g0068 1844 Gene3D - 570 674 IPR036388 -
Aed11g0068 1844 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1384 1467 IPR035441 -
Aed11g0068 1844 MobiDBLite consensus disorder prediction 957 984 - -
Aed11g0068 1844 MobiDBLite consensus disorder prediction 1507 1526 - -
Aed11g0068 1844 MobiDBLite consensus disorder prediction 1482 1552 - -
Aed11g0068 1844 PRINTS Adrenodoxin reductase family signature 830 843 - -
Aed11g0068 1844 PRINTS Adrenodoxin reductase family signature 807 829 - -
Aed11g0068 1844 PANTHER FLAVIN MONOAMINE OXIDASE 497 1840 - -
Aed11g0068 1844 Gene3D - 914 1241 - -
Aed11g0068 1844 Pfam SWIRM domain 584 661 IPR007526 GO:0005515
Aed11g0068 1844 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 497 1840 - -
Aed11g0068 1844 MobiDBLite consensus disorder prediction 1 86 - -
Aed11g0068 1844 SUPERFAMILY FAD-linked reductases, C-terminal domain 1124 1235 - -
Aed11g0068 1844 Coils Coil 740 764 - -
Aed11g0068 1844 Coils Coil 1302 1329 - -
Aed11g0068 1844 Gene3D - 808 1284 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0068 Aed-Chr11 541493 554010 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Aed11g0068 Amino_oxidase 1.4e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0068 11 541493 554010 Aed11g0068 11 541493 554010 ECH