Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0067 ATGACAACAACAACAGCAAAATCTTCGCTCCTCTTAACAATTCTCCTCGTCAGCATAACCTTCCCGGTGGAAGCCAGCGGCGGCGGGCGCTGGTTGCTCCTCCAGAAAAGCATCGGCATTGTGGGGATGCACATGCAGCTCCTCCACACCGACACGGTGATGATCTACGACCGCACCGACTTCGGGCTCTCGAACCTCTCCCTCCCGGACGGCCTCTGCCGCCACGACGCCACCGAAATAGCCGTGAAAACCGACTGCAGCGCCCACTCCATCGAGTACGACGTGGCAAGCAACACCTTCCGCCCCCTCTTCGTCCAGACCAACGTCTGGTGCTCCTCCGGCTCCGTCGCCCGCGACGGTACCCTAGTCCAAACTGGCGGCTTCAACGACGGCGAAAGAAAGGTCCGCACCTTCACCCCCTGCCAAACCTCCACCTGCGACTGGGTCGAACTCCCCGACAGCCTCGTCGCCCGGCGCTGGTACGCCACCAACCACATACTCCCCGACGGGCGGCAAATAATCATCGGCGGCAGAAGACAATTCAACTACGAATTCTACCCGAAAAGCCACACCTCAGCGAAAAACGCTTACTCTCTACCCTTCCTCGTTCAAACCAACGACCCTCCCGAGGAGAACAACTTATACCCCTTCGTCTTCCTCAACGTCGACTCCACCCTCTTCATCTTCGCCAACAACAGAGCCATTCTCTTCGACTACACCAAAAACGCCGTCGTTAGAACATTCCCCAACGTGCCAGGTGGCGCCCCCAGGTGCTACCCCAGCACTGGTTCCGCTGTTCTTTTACCCTTGCGTTATCCATACACCCAAGCCCAGGTTTTAATTTGCGGCGGAGCCCCGAGAGGCTCTTTTACCCAAGCCAAAAATAACGGTAACTTTCTCGGAGCTTTGAATACCTGTGCCCGGATTCAAATAACCGACCCGAACCCGAATTGGGCTATGGAGACAATGCCTCTTGCTAGAGTCATGGGAGACATGATTCTTCTCCCAAACGGCAACGTTTTGATCATTAACGGAGCGAGTTCGGGGAGTGCTGGCTGGGAGTTCGGACGCGACCCGGTTTTGAATCCGGTTGTTTATAACCCGAATAAACCAACCGGATCGCGGTTCGATATTCTAGACGCGACGAACACTCCTAGAATGTACCATTCCACTGCCGTTTTGCTTCGCGACGGAAGAGTCCTTGTGGCTGGGAGCAACCCTCACATTGGTTACAATTTCAGCAACGTGATGTTTCCAACGGAGCTTAGTTTGGAGGCGTATCATCCTTCGTATTTGGAACCCGTGTTCGATAACGTGCGTCCCAGGATTGTGTTTCCTGAGAGTGAGGAACAAACCAAGGTCATGCATGGTGAGAAGCTGAAGGTTCGGGTTGACGTGGCGGGGTCGTTGGTTCCGAGTTTGCTGTCGGTGACGGTTCTGGCGCCGCCTTTTAACACGCACTCGTTCTCGATGAATCAGAGGATGCTGGTGCTGGAACCTAGCAACGTGACAAATGTGGGAGGACCAACAACGTATGAAATTGAAGTTACCACACCGGGTTCACCTGTTCTTGCACCACCCGGTTTTTATCTCCTATTTGTGGTCCACCAAGATATTCCAAGCAAGGGAATTTGGATCCAGATACTTTAA 1650 0.5424 MTTTTAKSSLLLTILLVSITFPVEASGGGRWLLLQKSIGIVGMHMQLLHTDTVMIYDRTDFGLSNLSLPDGLCRHDATEIAVKTDCSAHSIEYDVASNTFRPLFVQTNVWCSSGSVARDGTLVQTGGFNDGERKVRTFTPCQTSTCDWVELPDSLVARRWYATNHILPDGRQIIIGGRRQFNYEFYPKSHTSAKNAYSLPFLVQTNDPPEENNLYPFVFLNVDSTLFIFANNRAILFDYTKNAVVRTFPNVPGGAPRCYPSTGSAVLLPLRYPYTQAQVLICGGAPRGSFTQAKNNGNFLGALNTCARIQITDPNPNWAMETMPLARVMGDMILLPNGNVLIINGASSGSAGWEFGRDPVLNPVVYNPNKPTGSRFDILDATNTPRMYHSTAVLLRDGRVLVAGSNPHIGYNFSNVMFPTELSLEAYHPSYLEPVFDNVRPRIVFPESEEQTKVMHGEKLKVRVDVAGSLVPSLLSVTVLAPPFNTHSFSMNQRMLVLEPSNVTNVGGPTTYEIEVTTPGSPVLAPPGFYLLFVVHQDIPSKGIWIQIL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0067 549 Pfam Glyoxal oxidase N-terminus 43 284 IPR009880 -
Aed11g0067 549 Gene3D - 26 434 IPR037293 -
Aed11g0067 549 Coils Coil 549 549 - -
Aed11g0067 549 Pfam Galactose oxidase-like, Early set domain 450 548 IPR015202 -
Aed11g0067 549 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 20 548 - -
Aed11g0067 549 SUPERFAMILY E set domains 436 548 IPR014756 -
Aed11g0067 549 Gene3D Immunoglobulins 439 549 IPR013783 -
Aed11g0067 549 CDD E_set_GO_C 436 548 IPR015202 -
Aed11g0067 549 SUPERFAMILY Galactose oxidase, central domain 91 433 IPR011043 -
Aed11g0067 549 PANTHER SECRETED PROTEIN-RELATED 20 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0067 Aed-Chr11 536267 537916 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0067 11 536267 537916 Aed11g0067 11 536267 537916 ECH
Aed11g0067 11 536267 537916 Aed9g0241 9 1733104 1734741 PCT
Aed9g0240 9 1727770 1729413 Aed11g0067 11 536267 537916 PCT