Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0065 ATGGAAGGGGTTGATCAGAGTAATATGAATCGAAATTGTTCTGTATTTGGTTCATCATCAGGGGCTGCTCTTAGACCCCCAAATCGATTGAATAATGTTATGCCTATTAATCAAATGGGTGTTGCTGAGAACCAGAAACCCTATGGTATACCACCCTCACACCCCAATACCAATATTTCACCTTCATCACCTTATCCTCAATTTTTTGCCTCTCAATCCCAATCCAATTCGGTTTCCCAGCGTTTGAGTTCTCCCAATTTGAGCCCTGCTTCGTCCCATTCCAGGTCTTTGTCTCAGCCCTCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCCCCTTATAGAGAACCTTCCTTTTCCGACTCGATTTCAACTGATGTGTCTGCTGAGGAAAGCTTGGCTACCTCTCATGCCCCTTTGCCTAATTGCGGTCACACGCTTCAGCTTGGCCATTCTCTTCCACCTCGGAAAGGACATAGGCGCTCTAGCAGTGATTCCCCTTTAGGAATCTCTGATTTTATTCAGTCTGTCCCTCAGTTTGTTCCTTCTAGGACTTGGAGTGACCATGACAATTTGGCTTCTAGGGGAGGGAACTCTGGTTTTGAGAAGCCAATTCAGTTAGTTTTGAAGGAGCCGATGAAAGACATGGACCTTGTTGATGGTTTTGGTGGGGTACCTATGGTTGGGAGGAAAGAGGATGATACACTGGATGATTTGTTTAGTGCATTTATGAATTTGGACAATATTGATGGTCTGAATTTTTCTGGTATGGAAGATAAGGATTTGGATAGCAGAACCAGTGGTTCCAAGACAGTTGAGAGCAGTGATAATGAAGTTGAGAGTCATGCAAATGGAAAACTGACTCGTGCACAAGGGGCCAGTTCAAGCTGTTCTGAAGAGAGGAGGGAAGGAGTGAAGAGGAATTCTAATGGAGACATTGCACCAGGTTCCCGACACCGGAGAAGTTTCTCATTGGACAGCTCCATCGGAAATTTTCATATTGGAGATGAATCGCCTAAGCTTCCTCCTTTGCAAAACCGAGTTGGTCAATACTCGCCTACCAGTTCGATAGATGGTAAGACATCTGAAACAAGCATGGAGATTGGAAATGGTGAATTCAGCTCAGAGGAGCTAAAGAAAATAAAGGAGAATGATAAACTTGCTGAAATTGCCGGGGCTGATCCTAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCTCGCTCAAAAGAAAGGAAGATGCGGTACATTTCTGAATTAGAGCTCAAAGTCCAAACACTTCAGACAGAGACAACCACATTGTCTACTCAGTTTACCAAATCACAGATGGATCATTCAGAGCTTAAAAGTGAGAATAATGAGTACAAATTGAGGATTCAAGCCTTGGAACAGCAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTGGATGCTGAAGTGCGGCGTTTAAGACGCTCAGTTGCAGAACTTGGTGGAGAGTCCCTCCTCTCGAGTCACATGGCTCAACAGCTTGCTATTAGCCAACAAGTGTTCCAGTTACAGTATCAGCAGCCGCAGCCGCCTAATCAGCTTAGACATGTTCAATTGCACAATAGCCATTCCCCGGAGCAGACACAGACACAGACTCAGGCACAGCGCCACAATGGAAAAGCTACTGCATACTGA 1677 0.4496 MEGVDQSNMNRNCSVFGSSSGAALRPPNRLNNVMPINQMGVAENQKPYGIPPSHPNTNISPSSPYPQFFASQSQSNSVSQRLSSPNLSPASSHSRSLSQPSFFSLDSLPPLSPSPYREPSFSDSISTDVSAEESLATSHAPLPNCGHTLQLGHSLPPRKGHRRSSSDSPLGISDFIQSVPQFVPSRTWSDHDNLASRGGNSGFEKPIQLVLKEPMKDMDLVDGFGGVPMVGRKEDDTLDDLFSAFMNLDNIDGLNFSGMEDKDLDSRTSGSKTVESSDNEVESHANGKLTRAQGASSSCSEERREGVKRNSNGDIAPGSRHRRSFSLDSSIGNFHIGDESPKLPPLQNRVGQYSPTSSIDGKTSETSMEIGNGEFSSEELKKIKENDKLAEIAGADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKSQMDHSELKSENNEYKLRIQALEQQSQLKDALNETLDAEVRRLRRSVAELGGESLLSSHMAQQLAISQQVFQLQYQQPQPPNQLRHVQLHNSHSPEQTQTQTQAQRHNGKATAY 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0065 558 SMART brlzneu 394 458 IPR004827 GO:0003700|GO:0006355
Aed11g0065 558 MobiDBLite consensus disorder prediction 347 369 - -
Aed11g0065 558 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 396 459 IPR004827 GO:0003700|GO:0006355
Aed11g0065 558 PANTHER BZIP TRANSCRIPTION FACTOR 69 558 - -
Aed11g0065 558 Coils Coil 414 434 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 117 134 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 43 101 - -
Aed11g0065 558 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 558 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 534 558 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 256 369 - -
Aed11g0065 558 Pfam bZIP transcription factor 398 456 IPR004827 GO:0003700|GO:0006355
Aed11g0065 558 MobiDBLite consensus disorder prediction 1 31 - -
Aed11g0065 558 Gene3D - 398 449 - -
Aed11g0065 558 SUPERFAMILY Leucine zipper domain 398 445 IPR046347 GO:0003700|GO:0006355
Aed11g0065 558 CDD bZIP_plant_RF2 399 471 IPR044759 GO:0003700|GO:0006355
Aed11g0065 558 Coils Coil 449 497 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 114 170 - -
Aed11g0065 558 MobiDBLite consensus disorder prediction 50 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0065 Aed-Chr11 505670 512425 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed11g0065 bZIP_1 3.3e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0065 11 505670 512425 Aed11g0065 11 505670 512425 ECH