Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0054 ATGGCTCTCCTAACTTCTCCCTTGCCTGAACAGTCCAGTACCCCCAAACGCCACAAGCGTAATAAGCAGCAGCAGCAACAACAACAACAACAGCAGAAACAAAAGCAAAAGCAGAAACAGAAACCGAAACCGGCCTCTTCATGGGACCAGATAAAGAACCTCTTGACCTGCAAACAGATCGAAGGGTCGAGAGTGCATGACCCTTCAAAAGGGTACTCGAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGATGTGGTTCATGGGAACACACGTGTTGTGCACAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTAGATTACTCACTAGGAAACCTGTTAAAACTACTACTACTACTCGTTCATCAGGTTCTGCAAAATCAAACGGTGGGGCAACCTACACGTCATCATCATCTTCCAGAGGCATGCAATTCAGAAAGCTATCAGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAATTGCGAGGAGCAGTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAAAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTAGGTCCGGAGGATTCGGGTCGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGACAACCCGATATGCAAGATCGAACGGATACTGAAAGTTCACAACACCCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACCGTAAAGAACCGTGCTCTGGGCAGCACCAAGAAAAACCCTAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGTTCCTCCTCACTCTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACCATCATCAGGCACGGTTTCCAAGGTGGAACCGGCGGCGTTGGAGACCACGTGAAGGTGAAGGGCGTGATGACCACCGCCAGCAGCGGTAGGGCCCACGACTCGGTGGTTTGCGGTGATGCCACGCGCAGGGCCATGCTGGTGTGCCGCGTGATCGCGGGACGGGTGAAGCGCGTGTCGGAGGACGCGCCTTCGGAGGAGGAACACGTGTCGGGTGCGTCGTATGATTCCGTAGCTGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTCATTTACAAGGTGCTTTCGTGTTAG 1263 0.5241 MALLTSPLPEQSSTPKRHKRNKQQQQQQQQQQKQKQKQKQKPKPASSWDQIKNLLTCKQIEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETRLLTRKPVKTTTTTRSSGSAKSNGGATYTSSSSSRGMQFRKLSGCYECHMIIDPSRLPIARSSVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGTGGVGDHVKVKGVMTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVSEDAPSEEEHVSGASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVLSC 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0054 420 MobiDBLite consensus disorder prediction 95 146 - -
Aed11g0054 420 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 25 418 - -
Aed11g0054 420 MobiDBLite consensus disorder prediction 1 51 - -
Aed11g0054 420 MobiDBLite consensus disorder prediction 24 51 - -
Aed11g0054 420 PANTHER BNAC02G23540D PROTEIN 25 418 - -
Aed11g0054 420 Coils Coil 19 41 - -
Aed11g0054 420 Gene3D - 202 417 - -
Aed11g0054 420 SUPERFAMILY ADP-ribosylation 203 416 - -
Aed11g0054 420 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 206 IPR013087 -
Aed11g0054 420 ProSitePatterns Zinc finger C2H2 type domain signature. 178 201 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0054 Aed-Chr11 363195 367465 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed11g0054 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0054 11 363195 367465 Aed11g0054 11 363195 367465 ECH