Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0053 ATGTCAGCTGAAAAGAGATCACAGATAAAAGAGGCAACCATGATGTCTTCTGTTACTGCCGCCTCCTCCGCCGCCGCAGGATCCTATCTCTCACGATCGCGACGGCGGCAATTAACGGTGGCTCTCCAATCTGACGTGTCTGTCACCCCAAGCAGAATATTGACCAAACTCAAACACGAGTGTGCCACTCCTCTGCCCCTTCTTCAGCAAGTGGCCAAAGACATGTCTGCTGACATGCGTGCTGGGCTTGGGCCTGGGCCCAGGCCCGGGCTTCCCATGATACCCAGCTATGTTGAAAATCTTCCCACGGGGAACGAGAAAGGGTTGTTTTATGCATTGGATCTCGGAGGAACAAACTTCCGTGTGCTGAGGGTACAGTTGGGTGGCAAAGATGAGCGTGTCATTGCCACTGAATTTGATCAAGTTTCCATACCTCACCAACTCATGTTTGCTACATCTCAGGAGCTGTTTGATTTCATTGCTTCGGGGCTAGCAAAGTTTGCGTCCAAGGAGGATGGAAGATTTCGTATATCACCGGGAAGAAAGAGAGAGATTGGGTTCACGTTTTCATTTCCTGTGAAGCAAACATCTATTGATTCTGGCATACTAATCAAATGGACCAAGGGTTTTGCAGTCTCTGGAACAGCAGGAAGAGATGTGGTTGCTTGTCTGAATGAGGCAATGGAAAGGCAAGGAATAGACATGCGAGTTTCTGCACTGGTGAATGATACTGTGGGAACATTAGCCGGAGCAGAATACTGGGACAATGATGTCGTGGTTGCTGTTATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAGCAGACCAGTGGCATTCCTAAGTTACAGGGCCATGTCTCTTCTTCTGGGAAAATGATCATTAGCACTGAGTGGGGTGCTTTCTCAAAAGGTCTCCCTTTAACCGAGTTTGATAGGGAAATGGATGCTGCTAGCATCAATCCGGGCGAGCAGATTTTTGAAAAAACAATCTCAGGAATGTATCTAGGTGAAATCGTTAGACGAGTGCTACTGAAATTGGCTGAAGAGGGTGGTTTGTTTGGAAAATCTCTCCCGCAGAAACTATCTACACCTTTCATACTCGGGACCCCAGATCTATGTGCCATGCAGCAGGACTGTTCTGGCGATTTACAAGCAGTTGGGTCCCTCCTCTTTGATAAAGCAGGGGTTGAATCTAATTTAAGTGAAAGAAAAACGGTTTTGGAGGTTTGTGATACTATTGTAAAGCGAGGTGGGAGCTTAGCTGGTGCAGGAATAGTGGGGATTCTACAAAAAATGGAAGAGGATCAGAGAGGTCTCATATTTGGGAATGGGAAGAGAAGTGTTGTTGCCATCGATGGGGGCTTATACGAAAATTATCCTCAATACAGGGCTTATATGCAAGATTCAGTCAAAGAACTGCTAGGAACAGAAAAGTCAAACAATGTGGTGATAGAGCATAATAAAGATGGATCTGGCATAGGAGCTGCTCTATTGGCTGCTTCAAACTCCATGTACAACCATGACTTATAG 1530 0.4634 MSAEKRSQIKEATMMSSVTAASSAAAGSYLSRSRRRQLTVALQSDVSVTPSRILTKLKHECATPLPLLQQVAKDMSADMRAGLGPGPRPGLPMIPSYVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFDQVSIPHQLMFATSQELFDFIASGLAKFASKEDGRFRISPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTAGRDVVACLNEAMERQGIDMRVSALVNDTVGTLAGAEYWDNDVVVAVILGTGTNACYVEQTSGIPKLQGHVSSSGKMIISTEWGAFSKGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKLAEEGGLFGKSLPQKLSTPFILGTPDLCAMQQDCSGDLQAVGSLLFDKAGVESNLSERKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDQRGLIFGNGKRSVVAIDGGLYENYPQYRAYMQDSVKELLGTEKSNNVVIEHNKDGSGIGAALLAASNSMYNHDL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0053 509 Gene3D - 96 499 - -
Aed11g0053 509 CDD NBD_sugar-kinase_HSP70_actin 112 274 - -
Aed11g0053 509 ProSiteProfiles Hexokinase domain profile. 48 500 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Aed11g0053 509 ProSitePatterns Hexokinase domain signature. 185 210 IPR019807 GO:0004396|GO:0005524|GO:0006096
Aed11g0053 509 Gene3D - 74 488 - -
Aed11g0053 509 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 28 505 - -
Aed11g0053 509 SUPERFAMILY Actin-like ATPase domain 257 502 IPR043129 -
Aed11g0053 509 PRINTS Hexokinase family signature 111 127 - -
Aed11g0053 509 PRINTS Hexokinase family signature 237 253 - -
Aed11g0053 509 PRINTS Hexokinase family signature 324 346 - -
Aed11g0053 509 PRINTS Hexokinase family signature 185 210 - -
Aed11g0053 509 PRINTS Hexokinase family signature 485 501 - -
Aed11g0053 509 PRINTS Hexokinase family signature 260 274 - -
Aed11g0053 509 PRINTS Hexokinase family signature 406 428 - -
Aed11g0053 509 PANTHER HEXOKINASE 28 505 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Aed11g0053 509 Pfam Hexokinase 260 500 IPR022673 GO:0005524|GO:0005975|GO:0016773
Aed11g0053 509 SUPERFAMILY Actin-like ATPase domain 44 255 IPR043129 -
Aed11g0053 509 Pfam Hexokinase 55 253 IPR022672 GO:0005524|GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0053 Aed-Chr11 353643 359637 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0053 11 353643 359637 Aed11g0053 11 353643 359637 ECH