Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0040 ATGGCAGAATTAGCCCCCCCAGCAGCTGAACAAAATGTAACATCTAAAACGGACCAACAACAAACCAAAACAGAGAGTGTTTCGTTTTTCGGCTTGTTTGCTGCGGCTGATGCAACTGACTGTGCCTTAATGTTCCTCGGAACTGTCGGTTCCTTTCTCCATGGTGCTGCTCTTCCTGTTTTCTTCATTTTGTTCGGTCGCATGATTGACTCTTTGGGACATCTTTCCAATAATCCTCAAAATTTGTCCTCCCGAATCTCTGAGCATGCTTTGTATTTGGTTTATCTTGGAGGAGTTGTTCTTGTATCGGCTTGGATGGGTGTTGCATTCTGGATGCAAACAGGGGAGAGGCAAACGGCACGATTGCGATTGAAATATTTGCAAGCAGTGCTAAAGAAGGACATTAATTTCTTTGACAATGAAGCCAGGGATGCTAATATCATTTTCCACATCTCCAGTGATGCAATATTGGTACAAGATGCAATTGGTGACAAGACAGGCCATGCCATTCGTTATCTTTCTCAATTCATTGTTGGATTCGCCATTGGATTCACCTCAGTGTGGCAGCTCACACTTCTCACCTTGGCTGTGGTTCCATTCATAGCTGTGGCTGGGGGAGCTTATACAATAATTATGTCTACTTTATCAGAAAAGGGTGAAGCAGCTTATGCTGAAGCTGGAAAAGTTGCAGAAGAGGTAATTTCTCAAGTGCGTACTGTTTACTCATTTGTAGGAGAAGAGAAAGCAGTTGGTTCATACTCAAAGTCACTTGATAATGCTCTCAAGTTGGGGAAGAAGGGTGGTTTAGCAAAAGGAATTGGAGTAGGCTTCACATATGGGCTATTATTTTGTGCTTGGGCATTGCTTCTATGGTATGCTAGCATACTAGTGAGGCATCACAAGACAAATGGAGGCAAAGCGTTCACAACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAAGCTGCTCCAAACCTCGGTTCCATTGCTAAAGGGCGCGTGGCTGCAGCCAGTATCATGAACATGATTGCGTCTGCTTCAAGCAATTCTAAAAAGTTGGATGATGGAAGTATTGTGCCACAAGTTGCAGGGGAAATTGAATTTGGTGAGGTCAGCTTTGCTTACCCCTCAAGATCCAATATGATCTTTGAAAAATTGAGCTTCTCAGTGAGTGCTGGGAAGACTATAGCAGTTGTAGGTCCAAGTGGTTCCGGAAAGAGCACAATTGTTTCACTAATTCAACGCTTCTATGACCCCGCTTCAGGTAAGATCCTGTTGGATGGATATGACCTAAAGACTCTTCAATTGAAATGGTTGAGAGAACAGATGGGCTTGGTAAGTCAAGAACCAGCACTATTTGCAACAACAATAGCTGGAAATATTTTATTTGGAAAAGAAGATGCTGACATGGATAAAGTTATACAAGCTGCCATGGCTGCAAATGCTCATTCTTTCATTCAAGGATTACCTGATGGTTACAAAACTCAGGTTGGAGAGGGTGGCACTCAACTTTCAGGGGGGCAAAAGCAAAGAATTGCCATAGCAAGAGCAGTTCTCAGAAACCCAAAAGTGTTGCTTTTAGATGAGGCCACAAGTGCACTAGATGCTGAATCAGAACTCATTGTTCAACAGGCATTGGAGAAAATAATGTCAAACCGTACAACAATAGTCGTAGCTCATCGATTATCCACCATACGCGATGTAGATACAATTGTTGTGTTGAAGAACGGCCAAGTGGTTGAGAGAGGGACTCATTTGGAATTGATGTCCAAAAATGGAGAGTATGTGAATCTGGTGAGTTTGCAAGCCACACAAAGCATCACAAACTCTAGTTCAATATCTCGCTCTGAAAGTTCAAGAAATTCTAGTTTTAGAGAACCTTCAGAAAACCTGACCTTAGAGGAACAGTTGAAGTTGGATACAGCAGCAGAAGTGCAACCAAGAAGAGATCAATACTTGTTGTTGCCACCATCAAAGGCTACTACTTCAACTCCATCAATTTTTTATTTACTGAAACTGAATGCTCCAGAGTGGCCCTATGCAATACTTGGATCAGTAGGTGCAATATTGGCTGGCATGGAAGCCCCTCTCTTTGCACTTGGAATCACTCACATTTTGACTGCATTTTATTCTCCTCAAGCTTCTAAAATCAAGCAAGAAGTTGATAGGGTTGCTTTTATATTTCTTGGAGTAGCTGTTATTACTATTCCTATCTATCTATTGCTACACTACTTTTATACATTGATGGGAGAGCGTCTCACTGCCCGTGTTCGTTTATTAATGTTCTCAGTTGCATGGTTTGATATGGATGAGAACAACACTGGCTCACTAACAGCCATGCTAGCTGCGGATGCAACATTAGTAAGAAGTGCTCTAGCTGACAGACTCTCAACCATTGTGCAAAATGTAGCTCTCACTGTGACGGCTTTTGTCATTGCCTTCACATTGAGTTGGAAACTAACAGCAGTTGTCGCAGCTTGCCTTCCCCTTCTCATAGGAGCTTCTATCACTGAGCAACTATTTCTCAAGGGGTTTGGAGGAGACTATGGCCATGCTTACTCGAAAGCAACTTCTTTGGCTCGTGAAGCTATTGCCAACATACGTACCGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAATCCAGTTTGGATCTGAATTGAACAAACCCAACAAACAAGCACTTCTACGTGGCCACATATCAGGTTTAGGCTATGGCGTAACTCAGCTGTTGGCTTTCTGTTCCTATGCACTTGGCCTTTGGTATGCATCAGTTTTAATCAAGAAGAACGAGTCAAATTTTGGAGACATCATGAAGTCCTTCATGGTCTTAATCATCACATCTCTGGCAATAGCAGAGACATTGGCTCTTACCCCAGACATTGTGAAGGGATCACAAGCACTAGGATCAGTTTTTGGCATTCTCCAAAGGGGAACAGCCATCACCCCAAATGACTCCAACTCTAAGACAGTAACCGATGTCAAAGGAGAGATAGAGTTTAGAAATGTTTCCTTCAAGTACCCTATGAGACCAGATATCACCATATTTCAGAACTTAAACCTCAGAGTCCCAGCAGGTAAGAGTCTTGCAGTAGTGGGGCAAAGTGGTTCAGGGAAAAGCACAGTGATTTCTTTGGTAATGAGATTCTATGACCCCGATTCCGGATCAGTTCTGATAGATGGATGTGATATCAGAAGCCTAAACCTGAGATCATTAAGGCTGAGAATAGGATTGGTTCAGCAAGAGCCTGCATTGTTCTCAACCACAGTTTATGAAAACATAAAGTATGGAAAAGAGGAGGCATCAGAGATAGAGGTAATGAAGGCAGCAAAAGCAGCAAATGCTCATGAATTCATAAGCAGAATGGCAGAAGGGTACAAAACTGAGGTTGGTGAGAGAGGGGTGCAGTTGTCAGGAGGACAGAAACAAAGAGTGGCAATTGCTAGAGCTATTCTGAAAGATCCATCAATTCTTCTGTTGGATGAAGCAACAAGTGCACTAGACACAGTATCAGAGAGGCTAGTCCAAGAGGCTCTTGACAAACTTATGGAAGGTAGAACAACGGTTTTGGTAGCTCACAGGCTTTCAACTGTTCGCGATGCAGACAGCATTGCAGTGCTTCAAAATGGAAGAGTTTCTGAAATGGGAAGCCATGAGAGGCTCATGGCCAAACCTGGAAGCATCTACAAGCAATTGGTTAGTCTACAGCATGAAACGCGTCGTGACCAAGAAGACCATTGA 3747 0.4289 MAELAPPAAEQNVTSKTDQQQTKTESVSFFGLFAAADATDCALMFLGTVGSFLHGAALPVFFILFGRMIDSLGHLSNNPQNLSSRISEHALYLVYLGGVVLVSAWMGVAFWMQTGERQTARLRLKYLQAVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPFIAVAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAVGSYSKSLDNALKLGKKGGLAKGIGVGFTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRVAAASIMNMIASASSNSKKLDDGSIVPQVAGEIEFGEVSFAYPSRSNMIFEKLSFSVSAGKTIAVVGPSGSGKSTIVSLIQRFYDPASGKILLDGYDLKTLQLKWLREQMGLVSQEPALFATTIAGNILFGKEDADMDKVIQAAMAANAHSFIQGLPDGYKTQVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDAESELIVQQALEKIMSNRTTIVVAHRLSTIRDVDTIVVLKNGQVVERGTHLELMSKNGEYVNLVSLQATQSITNSSSISRSESSRNSSFREPSENLTLEEQLKLDTAAEVQPRRDQYLLLPPSKATTSTPSIFYLLKLNAPEWPYAILGSVGAILAGMEAPLFALGITHILTAFYSPQASKIKQEVDRVAFIFLGVAVITIPIYLLLHYFYTLMGERLTARVRLLMFSVAWFDMDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWKLTAVVAACLPLLIGASITEQLFLKGFGGDYGHAYSKATSLAREAIANIRTVAAFGAEDRISIQFGSELNKPNKQALLRGHISGLGYGVTQLLAFCSYALGLWYASVLIKKNESNFGDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVFGILQRGTAITPNDSNSKTVTDVKGEIEFRNVSFKYPMRPDITIFQNLNLRVPAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGSVLIDGCDIRSLNLRSLRLRIGLVQQEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMAEGYKTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTVLVAHRLSTVRDADSIAVLQNGRVSEMGSHERLMAKPGSIYKQLVSLQHETRRDQEDH 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0040 1248 CDD ABC_MTABC3_MDL1_MDL2 1000 1238 - -
Aed11g0040 1248 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 546 1238 - -
Aed11g0040 1248 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 450 565 - -
Aed11g0040 1248 MobiDBLite consensus disorder prediction 612 631 - -
Aed11g0040 1248 Gene3D - 990 1239 IPR027417 -
Aed11g0040 1248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 603 IPR003439 GO:0005524
Aed11g0040 1248 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 983 - -
Aed11g0040 1248 Gene3D - 359 607 IPR027417 -
Aed11g0040 1248 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 546 1238 IPR039421 -
Aed11g0040 1248 Pfam ABC transporter 386 534 IPR003439 GO:0005524
Aed11g0040 1248 SUPERFAMILY ABC transporter transmembrane region 672 978 IPR036640 GO:0005524|GO:0016021
Aed11g0040 1248 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 28 469 IPR039421 -
Aed11g0040 1248 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 450 565 IPR039421 -
Aed11g0040 1248 Pfam ABC transporter transmembrane region 685 951 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed11g0040 1248 Pfam ABC transporter transmembrane region 44 317 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed11g0040 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 989 1238 IPR027417 -
Aed11g0040 1248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1236 IPR003439 GO:0005524
Aed11g0040 1248 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed11g0040 1248 SMART AAA_5 394 580 IPR003593 -
Aed11g0040 1248 SMART AAA_5 1027 1213 IPR003593 -
Aed11g0040 1248 Gene3D ABC transporter type 1, transmembrane domain 853 1242 IPR036640 GO:0005524|GO:0016021
Aed11g0040 1248 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g0040 1248 ProSitePatterns ABC transporters family signature. 506 520 IPR017871 GO:0005524
Aed11g0040 1248 Gene3D ABC transporter type 1, transmembrane domain 608 838 IPR036640 GO:0005524|GO:0016021
Aed11g0040 1248 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 341 - -
Aed11g0040 1248 Pfam ABC transporter 1019 1167 IPR003439 GO:0005524
Aed11g0040 1248 Gene3D ABC transporter type 1, transmembrane domain 17 346 IPR036640 GO:0005524|GO:0016021
Aed11g0040 1248 CDD ABC_MTABC3_MDL1_MDL2 368 604 - -
Aed11g0040 1248 SUPERFAMILY ABC transporter transmembrane region 40 341 IPR036640 GO:0005524|GO:0016021
Aed11g0040 1248 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 965 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed11g0040 1248 ProSitePatterns ABC transporters family signature. 1139 1153 IPR017871 GO:0005524
Aed11g0040 1248 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 28 469 - -
Aed11g0040 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 604 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0040 Aed-Chr11 271132 276166 Transposed