Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0022 ATGGGAGTGGGGTTCTCTAAGGCATTAACAGTACAGAAACCAGAGAATGAAATTCCCAATGCCTCCCCAGATTACACTCCTCAACTCACCTACAATCAACCAAGGATAAACTTCCTAATTCCACCTCCACTTATTGTACCTCCTAAGCCTACCGAATCTTGTTCAGTTCTAGGGAAACCTTACGTTAAAATAAAGCAGATATACGATATGAAGGAAGAGCTGGGAAGAGGCAAGTTTGGAGTCACTTATATGTGTGTAGAGAAGGCCAAGGCCACAGGCACAGGAGGAGGACGAGCCTATGCATGCAAATCCATAGCAAAGAAGGATAATGATATTCTTGTTAGAAGAGAGGTTATGATTATGCACCATCTTTCGGAGCAACACAACGTAGTGGAGTTCAAGGTAGCTTACGAGGACAGGAAGAACGTGCACCTTGTCATGGAGCTCTGTAGTGGAGGCGAACTCTTCGACCGCATTGTTGCCAGAGGACACTACTCGGAGCGTGAAGCGGCCAAAATCATGAGACAGATTGTGCATGCGATTCATGTGTGCCATTTCATGGGTGTCATGCATCGAGACATCAAGCCTGAGAACTTCTTGTTCGTCACCAAGGACCAGGATTCCCCTTTGAAACTCTCCGATTTTGGATCCTCTCTCTTCTTTCACAATGGTAAACTGTACACAGATTTTGTTGGAAATGCATATTACGTGGCTCCAGAGGTTTTGAAACGGAGTTATGGAAAGGAGATAGATGTCTGGAATGCAGGAGTCATTTTATACATCCTCCTCACTGGCCTGCCTCCATTTTCGGCTGAAACCGAGAAAGGCATATTTGATGCTATTTTGGGAGGAAAGTTTGATATGGATAGCGAGCCATGGCCTTCTATTTCAGAAGCTGCAAAAGATTTGGTTAGAAAAATGCTGACTTATGACCCTAAGGAACGCATCACAGCTGCTGATGCCCTTGAACACCCTTGGATGAAGGAAGCTGCTGATGGTAAAGCATCAAACAAGCATCCAGACAGTGCTGTTTTAATTAGGATGAAACGGTTTAGAGCAATGAACCATATGAAGAAGCTTGCTTTGAAGGTAATAGCAAAAAATCTTTCAGAGGAAGAAACAAAGGGCCTGAGACATATGTTCAACAATATGGATACTGATGGCAGTGGCACAATCACATTTGAAGAACTCAAATCTGGATTGTCCAGATTGGGTTCCCAGCTAAGTGACTCCGAAATAAGGATGCTAATGGATGCTAATGGGACTATTGACTACTGTGAATTCATTGCTGCCACTATGGATCGGCATAAACTGGAGAAGGGAGAGAGTTTGTTTAAAGCTTTTCAATACTTTGACAAGGATGACAACGGTTATATAACTAGAGATAAACTTAGAGAGGCAATAACAGAGCAACAAATGGGAGATGAAGCTGCTATAGATGAAGTCTTCGAGAACGTTGACTCTGACAAAGTGTGTTATATATAG 1485 0.431 MGVGFSKALTVQKPENEIPNASPDYTPQLTYNQPRINFLIPPPLIVPPKPTESCSVLGKPYVKIKQIYDMKEELGRGKFGVTYMCVEKAKATGTGGGRAYACKSIAKKDNDILVRREVMIMHHLSEQHNVVEFKVAYEDRKNVHLVMELCSGGELFDRIVARGHYSEREAAKIMRQIVHAIHVCHFMGVMHRDIKPENFLFVTKDQDSPLKLSDFGSSLFFHNGKLYTDFVGNAYYVAPEVLKRSYGKEIDVWNAGVILYILLTGLPPFSAETEKGIFDAILGGKFDMDSEPWPSISEAAKDLVRKMLTYDPKERITAADALEHPWMKEAADGKASNKHPDSAVLIRMKRFRAMNHMKKLALKVIAKNLSEEETKGLRHMFNNMDTDGSGTITFEELKSGLSRLGSQLSDSEIRMLMDANGTIDYCEFIAATMDRHKLEKGESLFKAFQYFDKDDNGYITRDKLREAITEQQMGDEAAIDEVFENVDSDKVCYI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0022 494 SMART serkin_6 68 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0022 494 ProSitePatterns Protein kinases ATP-binding region signature. 74 107 IPR017441 GO:0005524
Aed11g0022 494 SUPERFAMILY EF-hand 368 490 IPR011992 -
Aed11g0022 494 Pfam EF-hand domain 444 469 IPR002048 GO:0005509
Aed11g0022 494 ProSiteProfiles Protein kinase domain profile. 68 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0022 494 SMART efh_1 376 404 IPR002048 GO:0005509
Aed11g0022 494 SMART efh_1 443 471 IPR002048 GO:0005509
Aed11g0022 494 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Aed11g0022 494 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Aed11g0022 494 Gene3D Transferase(Phosphotransferase) domain 1 155 345 - -
Aed11g0022 494 CDD STKc_CAMK 68 326 - -
Aed11g0022 494 Gene3D Phosphorylase Kinase; domain 1 70 154 - -
Aed11g0022 494 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 50 491 - -
Aed11g0022 494 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 491 - -
Aed11g0022 494 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Aed11g0022 494 Pfam Protein kinase domain 68 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0022 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Aed11g0022 494 Pfam EF hand 377 403 IPR002048 GO:0005509
Aed11g0022 494 Gene3D - 355 490 - -
Aed11g0022 494 SUPERFAMILY Protein kinase-like (PK-like) 68 341 IPR011009 -
Aed11g0022 494 Gene3D - 347 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0022 Aed-Chr11 151204 153210 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed11g0022 Pkinase 1.4e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0022 11 151204 153210 Aed11g0022 11 151204 153210 ECH