Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1055 ATGCAGGAGAATACTAAGGACCCCGCTATTAAGCTCTTCGGCCAGAAGATTCCCTTCCCCGGAGAACCCGACGACTCTCCAGCCATTGCCGCCGCCAAAACTGACTCGCCGCCGGCGATGGATGTCGACGAAGACCAAGAAGACTTTGATGACTCTGAGACTGAAGATAAGAAAGACAAGGATCCTCGAGGTGAAACAGTTAGTGAGAAAAGTCAGAAAACGAATGAAGCTGATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAAATGCTGCAGACTCTACGAAAAAAGCAGAGGGTATTCAGAACCCAAACACACCTTCCATAGACGAAGAATCTGCAAAGTCAAAGACCGACAACAACTCAGAGAACGATCAAAACAAAACACTGAAAAAACCGGACAAAATCCTGCCGTGTCCGCGATGCAACAGCATGGACACCAAATTCTGCTATTACAACAACTACAACGTCAATCAGCCGCGGTACTTCTGCAAGGCGTGCCAGAGGTACTGGACGGCGGGCGGCACCATGCGGAATGTGCCGGTCGGGGCGGGCCGGAGGAAGAACAAGAACTCAACCGCCTCACACTACCGCCACGTCACGATCTCCGAGGCCCTCCAGGCAGCGAGAATCGACGCGGCCGCCCCGAACGGAACTCATCATCATCGTCGTCATCAGGACCATCACCATCATCTCTTGAAACAGAATGGCAGAGTCCTCAGCTTCGGATTAGACCCTCCAATCTGCGATTCCATGGCATCAGTCCTTAACCTTACACCAGAGAAGAAAAATGGTATTACTCTCAATCAGAGAAACAAAGACAGCAACAACAACAACGGTGATGACTGCTCAAGTGCTTCTTCAATCACGGTTTCCAATGATGAAAGTGAGAAAAACACATCTCAAGAATCATTAGTGGTACAAAACAACAACAACAACAACGGTTTCATCCACCACCATGTTCCGTGTATTTCCACCACTCTTCCATGGCCTTATCCTTTTCCCTCAGCAGCAGCAGCACCTCCTATGTGCCCTCCAGGGTTTCCCATGTCATTCTACCCTGCAGCAGCATTTTGGAACATTCCATGGTTCCCCTCGCAACAACAACATCACCACCAATCTCTGAGTTCCGGTCCGAATTCTCCAACACTTGGAAAACACTCCCGCGACGACAATGATGACAACAACAACGACACAAAAATACAAGACCATTTGCACGAGGAACCACCACCCTCCAGGAGGTCTGTTCTGGTCCCGAAAACACTTAGAATCGATGACCCGAGTGAGGCTGCAAAGAGTTCCATATGGGCAACACTAGGGATCAAGAACGAGTGTGTCACAGGGGGTGGCATGTTCAAGGGGTTCCAATCAAAGAAAGCCGAGAAAGACCACGTTGTTGAAGCCTCTCCAGCGTTGAGGGCTAACCCTGCAGCTTTGTCTAGATCCCTTAACTTTCATGAGAACTCTTGA 1467 0.4997 MQENTKDPAIKLFGQKIPFPGEPDDSPAIAAAKTDSPPAMDVDEDQEDFDDSETEDKKDKDPRGETVSEKSQKTNEADPPPPPPPPPPNAADSTKKAEGIQNPNTPSIDEESAKSKTDNNSENDQNKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSTASHYRHVTISEALQAARIDAAAPNGTHHHRRHQDHHHHLLKQNGRVLSFGLDPPICDSMASVLNLTPEKKNGITLNQRNKDSNNNNGDDCSSASSITVSNDESEKNTSQESLVVQNNNNNNGFIHHHVPCISTTLPWPYPFPSAAAAPPMCPPGFPMSFYPAAAFWNIPWFPSQQQHHHQSLSSGPNSPTLGKHSRDDNDDNNNDTKIQDHLHEEPPPSRRSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVTGGGMFKGFQSKKAEKDHVVEASPALRANPAALSRSLNFHENS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1055 488 MobiDBLite consensus disorder prediction 1 136 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 111 134 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 368 417 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 53 72 - -
Aed10g1055 488 Pfam Dof domain, zinc finger 133 190 IPR003851 GO:0003677|GO:0006355
Aed10g1055 488 ProSitePatterns Zinc finger Dof-type signature. 138 174 IPR003851 GO:0003677|GO:0006355
Aed10g1055 488 ProSiteProfiles Zinc finger Dof-type profile. 136 190 IPR003851 GO:0003677|GO:0006355
Aed10g1055 488 MobiDBLite consensus disorder prediction 265 302 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 368 384 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 76 91 - -
Aed10g1055 488 PANTHER CYCLIC DOF FACTOR 2 1 487 IPR045174 GO:0003700|GO:0006355
Aed10g1055 488 MobiDBLite consensus disorder prediction 95 110 - -
Aed10g1055 488 MobiDBLite consensus disorder prediction 385 412 - -
Aed10g1055 488 PANTHER CYCLIC DOF FACTOR 1 1 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1055 Aed-Chr10 9360934 9364906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1055 1 486 C2C2-Dof Transcription Factor Family AT3G47500 45.527 7.44e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed10g1055 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1055 - - gmx:100798021 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1055 10 9360934 9364906 Aed6g1582 6 19849705 19853408 ECH
Aed3g0382 3 2697817 2701715 Aed10g1055 10 9360934 9364906 ECH
Aed11g0371 11 3143865 3147102 Aed10g1055 10 9360934 9364906 ECH
Aed10g1055 10 9360934 9364906 Aed10g1055 10 9360934 9364906 ECH