Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02857 ATGAGTATGTTAGGCCTCACAGACTTGGTTTTCATAGCTCCAAATCCTTCTTCTCTTCACCACCATCGCCAACAACAACTGATGTCAACGGAAAACGACAACAACAACAGCAACAACAACCCTCTGAGCGTTGGTTTCGGCATTTTTCCACTCTTAGCTGCCACGCCCTGCGTTCAGGTAGTTCAGAATCAGAGCAATGAGGAGGCGATGGAAGATTCTGGAAAGAAGAAGAAGAAGATCGACGAAGATGAAAATGGCAGTGAATTTAGGGTTTGTACGGACTGTGGAAACAGAGCGAAGAAAGATTGCGTGTACAGACGGTGCAGGAGTTGTTGCAAGGGGCGGGGATATGACTGTACCACTCACGTGAGGAGCACGTGGGTGCCTGCTCTAAAACGCCGCGAGCGCCACGTGGCGGTGACTGGTGGTGTTGGTGGAGAAGCTGCTAATAAGAGGACAAAGAACAATAATGGATGCGCAAGTGGAAGTGCTACCTCTCATTCTTATACTTCCACCAACTCTGATTCCTGCTATTCTCATCAAGATGCTAGGTTCAAAGAATCATTACCAGGTCATGTTCGTGCACCTGCTGTGTTCAGATGCCATAGAGTCTCAACGGTTGGAAATGGTGAAAATGAATTTGCATATTTAGCAACGGTTCATATAAGTGGCCATGTATTCAGGGGATTTCTCTATGACCATGGTGTTGATCCCAAAAATACAATAATGCCCTCCTATGCTTCAGAACTTCAACTTGGAAACAACTGCATTAGTAATGGGAAGAACAAGGAATGTTCTTCTTCTGCAATTGGGGTTACAACCAATGAATATGATAATCTCTATTCTGCTTCTGCTGCTAGCTAG 864 0.4537 MSMLGLTDLVFIAPNPSSLHHHRQQQLMSTENDNNNSNNNPLSVGFGIFPLLAATPCVQVVQNQSNEEAMEDSGKKKKKIDEDENGSEFRVCTDCGNRAKKDCVYRRCRSCCKGRGYDCTTHVRSTWVPALKRRERHVAVTGGVGGEAANKRTKNNNGCASGSATSHSYTSTNSDSCYSHQDARFKESLPGHVRAPAVFRCHRVSTVGNGENEFAYLATVHISGHVFRGFLYDHGVDPKNTIMPSYASELQLGNNCISNGKNKECSSSAIGVTTNEYDNLYSASAAS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02857 287 Pfam Domain of unknown function (DUF702) 91 237 - -
Adu10g02857 287 MobiDBLite consensus disorder prediction 150 172 - -
Adu10g02857 287 MobiDBLite consensus disorder prediction 146 172 - -
Adu10g02857 287 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 189 236 IPR006511 -
Adu10g02857 287 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 91 133 IPR006510 -
Adu10g02857 287 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 66 278 IPR007818 GO:0003700|GO:0006355
Adu10g02857 287 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 60 IPR007818 GO:0003700|GO:0006355
Adu10g02857 287 MobiDBLite consensus disorder prediction 20 39 - -
Adu10g02857 287 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 60 - -
Adu10g02857 287 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 66 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02857 Adu-Chr10 105100041 105103860 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu10g02857 DUF702 4e-52 No_clan