Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02689 ATGGCCAGTAATTCTTTTGTAATCCCCAATGGAAGCGGCAACGGCAATGGCATTGGAAAACTCAACCCACCGCCAAATCTGCAGAGGAACTACCAAGTGGTAGTGGCTGCTACACCAGATATGGGGATAGGTAAAGATGGGAAATTACCATGGAAGTTACCTACTGATCTCAAATTTTTTAAAGAGGTTACTGTAACAACATCTGATCCAGGGAAGAAGAATGCTGTTGTAATGGGTAGAAAAACATGGGATAGTATCCCTCTTAAATACAGGCCTCTTCCCGGCCGTCTTAATATTGTTCTTACTCGCTCAGATAGCTTTGATATTGCAATAGCAGAGAATGTTGTTATATGTAGAAGTATGGCTTCTGCTTTGGAATTGTTAGCTGAACCTCCCTATAGTTTGTCAATTGAGAAAATATTTGTTATAGGAGGTGGACAAATATTTAGGGAGACTTTAAATGCACCTGGATGTGAAGCTATCCACATCACTGAAATTCAGACTAGCATTGAGTGTGACACATTTATGCCTCCAGTTGATTCCTCTGTATTTCAGTTGTGGTACTCATCTTTTCCTAAGATGGAAAACAACATTCGCTATTCTTTCACAACTTATGTGCGTGTAAGGCGTTCGGTGGAGCATGCAACTCAGAATACTGATCCAGTTCTTGATAACAATTCAGATACTCTAAAATTTGAGTTCAAGGATTTTTCTTTTCTTCCTAAAATGATTCTTGAAAGACATGAAGAATACAAGTATCTTAGGCTGGTTGAAGAAATCATTTCTGAGGGTACAGCCAAAGATGATAGGACAAGGACTGGTACCTTGTCAAAATTTGGTTGCCAGATGAGGTTCAATTTGCGCAGAAACTTCCCTCTTCTTACTACAAAGAAAGTATTTTGGCGTGGGGTTGTTGAAGAGCTTCTTTGGTTTATTAGTGGGTCTACAAATGCCAAGGTAATGATATATTCATCCAATCGTTTTCTTCACACAAATGAATCATATCCTTTCCTAGTTATACTTGGCTTCACAGACAGGGAGGAAGGTGACTTGGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACTAATATGCATGCTGACTACTCCGGCCAAGGATTTGATCAGCTGTTAGATGTTATTAACAAGATAAGGCACAATCCCAATGATCGTCGGATCATTCTCTCCGCATGGAATCCAGCTGATCTTCAATTGGCGGCCCTTCCACCGTGCCACATGTTTGCACAGTTCTATGTAGCAAATGGGGAGTTATCATGTCAAATGTATCAACGATCTGCTGACATGGGCCTAGGCGTGCCATTTAATATTGCATCTTATGCCCTCCTGACCTGCATAATTGCTCATGTTTGTGAATTAGTTCCAGGTGATTTTATCCATGTCATTGGAGATGCACATGTTTACCAAAATCATGTGAAGCCTTTGCAGGAGCAGCTCCAGAACTTGCCAAGGCCTTTTCCGACTTTGAAGATAAATCCAGAGAAAAAAGATATAGATTCTTTTGTGGCTTCTGATTTCAAGCTCAGTGACTATAATCCTCACCAGAAGATTGAGATGAAGATGGCCATCTAA 1602 0.4076 MASNSFVIPNGSGNGNGIGKLNPPPNLQRNYQVVVAATPDMGIGKDGKLPWKLPTDLKFFKEVTVTTSDPGKKNAVVMGRKTWDSIPLKYRPLPGRLNIVLTRSDSFDIAIAENVVICRSMASALELLAEPPYSLSIEKIFVIGGGQIFRETLNAPGCEAIHITEIQTSIECDTFMPPVDSSVFQLWYSSFPKMENNIRYSFTTYVRVRRSVEHATQNTDPVLDNNSDTLKFEFKDFSFLPKMILERHEEYKYLRLVEEIISEGTAKDDRTRTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVVEELLWFISGSTNAKVMIYSSNRFLHTNESYPFLVILGFTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIRHNPNDRRIILSAWNPADLQLAALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCELVPGDFIHVIGDAHVYQNHVKPLQEQLQNLPRPFPTLKINPEKKDIDSFVASDFKLSDYNPHQKIEMKMAI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02689 533 CDD DHFR 34 206 IPR001796 GO:0004146|GO:0046654
Adu10g02689 533 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 242 533 IPR036926 -
Adu10g02689 533 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 533 - -
Adu10g02689 533 SUPERFAMILY Dihydrofolate reductase-like 29 207 IPR024072 -
Adu10g02689 533 Pfam Dihydrofolate reductase 32 207 IPR001796 GO:0004146|GO:0046654
Adu10g02689 533 PRINTS Thymidylate synthase family signature 410 425 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 PRINTS Thymidylate synthase family signature 428 454 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 PRINTS Thymidylate synthase family signature 291 312 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 PRINTS Thymidylate synthase family signature 466 483 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 PRINTS Thymidylate synthase family signature 384 403 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 231 533 IPR036926 -
Adu10g02689 533 CDD TS_Pyrimidine_HMase 253 486 IPR023451 -
Adu10g02689 533 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 30 207 IPR001796 GO:0004146|GO:0046654
Adu10g02689 533 PIRSF DHFR-TS 18 533 IPR012262 GO:0004146|GO:0004799|GO:0006730
Adu10g02689 533 MobiDBLite consensus disorder prediction 1 23 - -
Adu10g02689 533 Gene3D Dihydrofolate Reductase, subunit A 20 210 IPR024072 -
Adu10g02689 533 PANTHER THYMIDYLATE SYNTHASE 1 1 533 IPR045097 GO:0016741
Adu10g02689 533 TIGRFAM thym_sym: thymidylate synthase 346 533 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 ProSitePatterns Thymidylate synthase active site. 395 423 IPR020940 GO:0004799|GO:0006231
Adu10g02689 533 Hamap Thymidylate synthase [thyA]. 250 533 IPR000398 GO:0004799|GO:0006231
Adu10g02689 533 Pfam Thymidylate synthase 252 533 IPR023451 -
Adu10g02689 533 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 42 64 IPR017925 GO:0004146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02689 Adu-Chr10 103538727 103541655 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02689 10 103538727 103541655 Adu10g02689 10 103538727 103541655 ECH