Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00299 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTACAGGACTTGATTGGAACAAGGCCTTGTTGCAATCATCACAAAACTTGGAGCTACCATCAAAGATTACTACTATGAAGAAACAACAACAACAACAACAACAACAAATTCAGCAGCAGCAACCAATATTAGAGCCTCTGAGGTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGTAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTCCGCAATGTTCCTGTTGGAGGTGGAAGAAAGAATAAGAGACCAACCAAGAAATCAACAACCACTACTTCTATTAGCACCACCACCACTACCACTGTTACCACCTTAAATGGTGGTGGTGGAAAAATGGAAGTTCAACCTCAGAGTAATCGTCCTCTTCCTCCTCCTCCTCCTCCTACTCTTTACCAATCTATGATTCGTCCACCACCTTTGCTACCACAACAGAATAATAATAATAATCTATCAGAAGTTAAGGACTTTGGTGGTAGTGAAATGTTTCTGAGTTCATCATCATCAGCTTTGAATCTTCCTCAGAGTCAAAGTCTAATCTTTCCCTTCTCAACAGCATCAAGTTCTAGTTTTGATGCAAACCCATGTTCAGTTTCAGCCTCCAATATTTATAGCTATGGTGGAGAAGAGTTTAAGACAATGGAGGAGACAACCATCAATGGTACTAACACACACCTATGGGAGATTCCATTACCTGCTACAACAACAAGTGTTGCTATGGAAATGCCTTCAAATTATTGGGGTTGGGAGGACCTTGATCCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 891 0.4085 MGLSSKQVSSTGLDWNKALLQSSQNLELPSKITTMKKQQQQQQQQIQQQQPILEPLRCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPTKKSTTTTSISTTTTTTVTTLNGGGGKMEVQPQSNRPLPPPPPPTLYQSMIRPPPLLPQQNNNNNLSEVKDFGGSEMFLSSSSSALNLPQSQSLIFPFSTASSSSFDANPCSVSASNIYSYGGEEFKTMEETTINGTNTHLWEIPLPATTTSVAMEMPSNYWGWEDLDPLVSTDLNVPWDDSDIKP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00299 296 Pfam Dof domain, zinc finger 56 108 IPR003851 GO:0003677|GO:0006355
Adu10g00299 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 38 224 IPR045174 GO:0003700|GO:0006355
Adu10g00299 296 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Adu10g00299 296 PANTHER OS06G0284500 PROTEIN 38 224 - -
Adu10g00299 296 MobiDBLite consensus disorder prediction 97 156 - -
Adu10g00299 296 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Adu10g00299 296 MobiDBLite consensus disorder prediction 113 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00299 Adu-Chr10 3531634 3533403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00299 46 123 C2C2-Dof Transcription Factor Family AT5G60200 65.823 1.78e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu10g00299 zf-Dof 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00299 - - gmx:100818111 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03380 03 120830190 120831149 Adu10g00299 10 3531634 3533403 PCT