Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00253 ATGGAGAGAGCAGAGCAACAGCAGAAGGAGAAAGGAGGAGTAAAGTGCCCTAGATGTGATTCATCAAACACCAAGTTTTGTTACTACAACAACTACAGCCTGTCACAGCCAAGGCACTTCTGCAAAGCCTGCAAGAGATACTGGACAAGAGGTGGAACCCTCAGAAACGTTCCTGTTGGCGGCGGTTGCAGAAAGAACAAGCGTCGTCTCAACCACCCACACCCAAACACTACCTCTTCTCAGATCAACACCAACAATCATGATGTCAATCTCCCCTCCTTATTCCACACCTTCACTTCTCATGCTGCTCTTCAAAATAATCATGCCTTTGCTGCTTCTTCTTCAAGCTATGATTCTATCTTGTTACCTCCTGCTTCTACAACTATGATGCCGATGCAGCAAAACGTCATCAATGGTGGTTATTATTGCCAAAACCAGATGGAGCAGCAGCCTCATGTGCCTAATTTCTCTGATCCAAATTCTCTTTATTATTGGAGTAATGCTTTCACTTCTTGGAACAACGATAATAATCATCCTCTTACTTCTCTCATCTAA 555 0.4378 MERAEQQQKEKGGVKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRRLNHPHPNTTSSQINTNNHDVNLPSLFHTFTSHAALQNNHAFAASSSSYDSILLPPASTTMMPMQQNVINGGYYCQNQMEQQPHVPNFSDPNSLYYWSNAFTSWNNDNNHPLTSLI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00253 184 PANTHER DOF ZINC FINGER PROTEIN DOF2.4-LIKE 4 147 - -
Adu10g00253 184 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Adu10g00253 184 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 147 IPR045174 GO:0003700|GO:0006355
Adu10g00253 184 MobiDBLite consensus disorder prediction 59 85 - -
Adu10g00253 184 Pfam Dof domain, zinc finger 14 68 IPR003851 GO:0003677|GO:0006355
Adu10g00253 184 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00253 Adu-Chr10 3106178 3107236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00253 14 68 C2C2-Dof Transcription Factor Family AT1G28310 94.545 2.34e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu10g00253 zf-Dof 5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00253 - - adu:107468324 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00253 10 3106178 3107236 Adu10g00253 10 3106178 3107236 ECH
Adu03g03425 03 121483892 121485085 Adu10g00253 10 3106178 3107236 PCT