Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00252 ATGGAGAGAGCAGAAGAGCAACAGCAAAAGCAGAGGGAGGAAGAAGGAGTAAATTGCCCTAGATGTGATTCATCAAACACCAAGTTCTGTTACTTCAACAACTACAGCCTGTCATCACCAAGGTACTTCTGCAAAGCCTGCAAGAGATACTGGACAATAGGTGGAACCCTCAGAAACGTTCCTGTTGGCGGCGGTTGCAGAAAGAACAAGCGTCGTCTCAACCACCCACACCCAAACACTTCGTCTCAACCACCCTAA 258 0.4806 MERAEEQQQKQREEEGVNCPRCDSSNTKFCYFNNYSLSSPRYFCKACKRYWTIGGTLRNVPVGGGCRKNKRRLNHPHPNTSSQPP 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00252 85 MobiDBLite consensus disorder prediction 64 85 - -
Adu10g00252 85 MobiDBLite consensus disorder prediction 1 24 - -
Adu10g00252 85 MobiDBLite consensus disorder prediction 1 19 - -
Adu10g00252 85 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 78 - -
Adu10g00252 85 ProSitePatterns Zinc finger Dof-type signature. 19 55 IPR003851 GO:0003677|GO:0006355
Adu10g00252 85 ProSiteProfiles Zinc finger Dof-type profile. 17 71 IPR003851 GO:0003677|GO:0006355
Adu10g00252 85 Pfam Dof domain, zinc finger 16 71 IPR003851 GO:0003677|GO:0006355
Adu10g00252 85 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 78 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00252 Adu-Chr10 3088536 3088793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00252 11 71 C2C2-Dof Transcription Factor Family AT5G60200 77.049 3.65e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu10g00252 zf-Dof 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00252 - - adu:107468324 152.14