LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu09g02766	ATGGTAACCGATTCCCACGACTCTCGTCGCAAGCATCGCCGATCCTCCTCTCCCGAAGACGCCGATAGATCCTCGAAGCGCCACAAGCACCGCCACCATAGCCACCGCCATCGCCACTCCACCAAGAAACGCGATGAAGACACCGAATACGATCGCGGAACTCTTGCTAGGATTCCTTCTCCAGCTCCTGTTTCTAACTCTGCTCCGTATAGCTCTCTCCCTGACGACGACGTCGAGGAGGGAGAGATTCTCGAAGAAGGTGAGATTGGAAAAAAGCAGACAGAATCTGATGCAGAGCCTGGTGAAATTGAGCTGTCAGGAAATCGAGATTCTCGATCCGATAACAAAATTCCGGGACCTGTCACAAAAAATTCAAAAACTGGAAAGGAGGACAGAAGTCATGGTAAATATGTTAGTCCTGCATTGGATACTGCAGACAAGCACCCTGGACTTCATGATGACTATGGTTCTCCTAACCAGTCAAGCCCTGAGCTTAAAGGTGGAAAGAATGCTAGAGATACTAAAGATGGTTTGGGTAATGGGTATTTGAACCCTAAATCATCCAAAGAAGATAAGAAGCAGAATGAGGGCCCTGGACAATTGAGAGGAAATGAGAAACTAAAAGGTGACTATGAAGAGAAAGAGATACGGGCAAATGGAATAAAACATAATTACCATACAAATTCATCATCTGATAGTGAAGGTGAAAAATATAGAATGTTAAGAAGTTCTCCTTCTCATGATAGATGTAGAAGTCGATCAAGATCAAGTGGTCATCCTAGGGACAGATCTCGTTCTCGTAGTATAGCAGATGAATATGCTCATTCCAAGAAAAGGCACTCTAGGGATCAAGGGCCCCTTCATCATAGTGGCAGAGATAAGACTGACTATGAGCATGATGAGGAAGGAATGAGAGCACGTGGAAGGGAGCATGGTCGTGGCAATGCAGACTTGTTGGTAGATGATAGGAGGGGACGTAGTTCCAGGTATCGTAGTCGAGAGTCCCAGGATCGCAGTAGGGACAGTCATGTGGATAGGGATTTATACAGGGAAAAGAAACGAGACGAAGCAAGCAGGAATAGGGAGGTTGATTGGGTGCGTAAAACAGAAAAGGAACGTGAAAGGAGCTATGAGAGGGATAGAAGGGACACAATAAAAGACAGAAGTAGAAAGGAAAGGGACAGGAGTAGGGATAATACAAGGGGTGGTGAGAGAGGAAGAGATTGGGATAGTGAAAGGGATGATAAGAATCGGGAAAGAGATCACATTAAGGAGAGGGAGAGGCGAGATGATAGATATAGGCACACTGATAAAGACACCGCATATAATAAGGATAAGCATTTGCGTCATGAGGATGGTGAAGACATTCGAGACAGATATAGAAAACATTCAAGACACGAAGAAACTGAATATCATCGGGAGAGAAACAGGAATTCTGATTCTGTAAAATTTTATAATTCTGCAAGAAGTGCCATGGAAGAGAATGAAAGCAAGCTAGAAAGAGGTGAGGTTGAACAAGATTACTTAGATGATGATACTCTGCAATTACCAGAGCAAGAAGAGGAAGATCTGAATAGGATTAAGGAGGAAAGTAGACGGAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGCAGAACAGGCAGCTGAAAATGAAGGAAAAGACAAGGAATCCGTGGACATTCCTACTGATGTTCCTGAAGCACATGATGGCAAGAATGATGGTATTGATGATGTAGAAACATCATTTGCTGTTGGGAAATCTACTCCTGAAAATTTGAATGTTGCTTCTAAGAAGATATCTGGTGCTGGTGGCCTGGGTGAGGGTACTCCTAAGAGTGAAAGATCAGACGACATGTTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCAGGAAAAGGGGATGGTATACTGATTGAGAGGGTTGGCCTACATGACAATTGGGATGACGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATACGAAGTCACTGCTGCACATGGGAGGGGTGTTTTTTCAACAGTGGTTCGGGCAAAGAATCTCAAGACTGGTAATGGTGAGCCAGATGAAGTTGCTATAAAAATCATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAGTTGGTCATACTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAAGTATTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATATGCAAAGCAACTATTTATTGCCCTGAAGCATCTTCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCTGATAATATGTTGGTGAACGAGGCTAAAAATGTCTTGAAGCTTTGCGACTTTGGTAATGCTATGTTTGCTGGTAAGAATGAAGTCACACCATATCTTGTCAGTCGGTTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCAATATGATCATCCGTTGGATATTTGGTCAGTAGGCTGTTGTTTGTATGAGCTCTATACAGGGAAAGTTCTTTTTCCAGGTCTTACAAACAATGACATGCTTAGGCTTCACATGGAATTAAAGGGTCCTTTTCCAAAGAAGATGTTGCGTAAGGGAGCATTCACTGACCAACATTTTGATCATGACCTGACTTTTCTTGCTACTGAAGAGGATCCTGTGACAAAAAAGGCTCTCCTGGAGAGGATCCAAAGATGTTAG	2823	0.43	MVTDSHDSRRKHRRSSSPEDADRSSKRHKHRHHSHRHRHSTKKRDEDTEYDRGTLARIPSPAPVSNSAPYSSLPDDDVEEGEILEEGEIGKKQTESDAEPGEIELSGNRDSRSDNKIPGPVTKNSKTGKEDRSHGKYVSPALDTADKHPGLHDDYGSPNQSSPELKGGKNARDTKDGLGNGYLNPKSSKEDKKQNEGPGQLRGNEKLKGDYEEKEIRANGIKHNYHTNSSSDSEGEKYRMLRSSPSHDRCRSRSRSSGHPRDRSRSRSIADEYAHSKKRHSRDQGPLHHSGRDKTDYEHDEEGMRARGREHGRGNADLLVDDRRGRSSRYRSRESQDRSRDSHVDRDLYREKKRDEASRNREVDWVRKTEKERERSYERDRRDTIKDRSRKERDRSRDNTRGGERGRDWDSERDDKNRERDHIKERERRDDRYRHTDKDTAYNKDKHLRHEDGEDIRDRYRKHSRHEETEYHRERNRNSDSVKFYNSARSAMEENESKLERGEVEQDYLDDDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQAEQAAENEGKDKESVDIPTDVPEAHDGKNDGIDDVETSFAVGKSTPENLNVASKKISGAGGLGEGTPKSERSDDMFCDDIFGETPTGVRKSGKGDGILIERVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKTGNGEPDEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDHDLTFLATEEDPVTKKALLERIQRC	940

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu09g02766	940	SMART	serkin_6	675	929	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02766	940	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	280	933	-	-
	Adu09g02766	940	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	802	814	IPR008271	GO:0004672\|GO:0006468
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	229	480	-	-
	Adu09g02766	940	SUPERFAMILY	Protein kinase-like (PK-like)	662	922	IPR011009	-
	Adu09g02766	940	ProSiteProfiles	Protein kinase domain profile.	675	940	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	26	40	-	-
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	1	25	-	-
	Adu09g02766	940	Gene3D	Transferase(Phosphotransferase) domain 1	735	940	-	-
	Adu09g02766	940	Coils	Coil	532	559	-	-
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	1	582	-	-
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	519	581	-	-
	Adu09g02766	940	CDD	STKc_PRP4	674	931	IPR044092	GO:0004674\|GO:0006468\|GO:0045292
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	85	111	-	-
	Adu09g02766	940	Pfam	Protein kinase domain	677	889	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02766	940	Gene3D	Phosphorylase Kinase; domain 1	645	734	-	-
	Adu09g02766	940	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	280	933	-	-
	Adu09g02766	940	MobiDBLite	consensus disorder prediction	186	221	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu09g02766	Adu-Chr9	115411750	115417612	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu09g02766	667	897	MAP Kinase Gene Family	AT5G19010	33.197	8.53e-23	102

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Adu09g02766		Pkinase	2.5e-41	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu09g02766	09	115411750	115417612	Adu09g02766	09	115411750	115417612	ECH