Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02702 ATGTGCAGCTATGGCGGCCACATCGTTCCCCGGCCTCACGACAAGTCGCTCTGCTATGTCGGCGGCGACACGCGAATCGTGGTGGTTGAGCGAACAACTTCACTCGCGGACCTGTCCACGCGCCTCTCAAAGACGTTCCTGAATGGAAGACCGTTCAGCCTCAAGTACCAGCTCCCGAACGAAGACCTGGATTCTTTGATTTCTGTTACCACCGACGAGGACCTCGACAACATGATCGACGAGTATGACCGAACCAACAACAACCCTTCCGTGAAACCCTCGCGAATTCGGCTCTTCCTCTTCCCAACAAAGCCTGAATCGGTTCAGAGTATTCCGCCCATTCTAGAAAGTTCCGCCAAGTCTGATGATTGGTTCCTCAACGCCCTAAACGGCTCTGGATTGCTCAACCGGGGTTTCTCTGACTCTGCCTCTGTGAATTGCCTTTTGGGTCTCGACGACGATGCTTCGGGGAATAATGTTGACCATAGCTCAAGGGACCCTGTCGAGGCTTCTTCTCAGCCTGGATCTTTTGGAAATGGCAAGAATCCCAAACAGGAGGTTCATTCTGTTCCCGATTCGCCTATGCTGGAGACTACTTCTTCGTTTGGCTCTACTTCTTCATCGCCGTCGCTGGCCAATTTGCCGCCGATTAGGGTTCATGTGGAAGATGGCAGCGGTGGCGGCGGGGTTAGGATGGTGCAGGATCACAAGGTTTTGGGAATTGAGGAGCAGTTTGCGCAGATGGGTGTGAGTGTTGCCGGTGGATTGGGGCAGAAGCAAGACGAGGGGCTGGTGGTGCTTTCTTCGCCTCCGCCTCCGCCTGTGCCGGTCACTCTATCTGCCGCTGGGGTGGGTGTGCCTGTTAGCTCAGCGTTGGTGTCTGGGGAGTACCAGAACAGGGTTTTCTCCGATGATGAGAGATCGGATCATAGCGTGCCTGTGGGTTACAGAAAACCACCGACACCTCAGCCACAGTTGCAGCAACAACCACAGCTTCAGCCTCAGCCTCAGTCTCAGCCGCAGCAAACACAGTCACAGTCACAACCTCAACATCAACAGGTTTTACAGCCTCAATTTCAACCCAAGTCAACTGGCGTCGTTGATTTGCCTTCTCCAGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATGCAATCTCTCGGCAAAAAGCTGTGATCTATCAAGACCAAGTTCAGATTCAGCCTGGGACTACAAGGGTTCCTAGTAACCCGGTTGATCCAAAACTAAACGTGTCCGATCCTCATGGTCGGATCCAGATGCAGCAGCTTGTACAGGACCCAGGATACTTGTTGCAACAGCAATTTGAACAACAGCCGCCGCCACAGCAGCCTCAACAGCAACAACAGCAGCAGTTCATTCATGGTACTCATTTCATTCACCATGCTCCTCCTGGGGCCGTGCCGATTTCCGCCTACTATCCAGTATATCCTTCCCAGCAACAGTCCCACCCCCAGGTTTACTACGTTCCTGCGAGACAGCCCCCGGCTTACAACATGCCTGTTCAGCAGCCTAACATGGCTGAATCCGCCTCAAACATTCCTTCCAGCCGTCCCCAGACTCCACCAAATCCCACCACATTGGTTCCACCTTCTGCAGCTTACAACCCCATGAGAAATGCTCCCATGCCCAAGACTGAAATGACGGCAGCTGCATACAGAGCTGTGAGTGCCGGTACCCCTCAATTGGTTCAAGTTCCTACCAGTCAGCATCAGCAACAATATACTACTCTCAACCTCTGGCACCCTCAATGCCTTCTCAGTACCAGACCATGA 1791 0.5288 MCSYGGHIVPRPHDKSLCYVGGDTRIVVVERTTSLADLSTRLSKTFLNGRPFSLKYQLPNEDLDSLISVTTDEDLDNMIDEYDRTNNNPSVKPSRIRLFLFPTKPESVQSIPPILESSAKSDDWFLNALNGSGLLNRGFSDSASVNCLLGLDDDASGNNVDHSSRDPVEASSQPGSFGNGKNPKQEVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGSGGGGVRMVQDHKVLGIEEQFAQMGVSVAGGLGQKQDEGLVVLSSPPPPPVPVTLSAAGVGVPVSSALVSGEYQNRVFSDDERSDHSVPVGYRKPPTPQPQLQQQPQLQPQPQSQPQQTQSQSQPQHQQVLQPQFQPKSTGVVDLPSPDSVSSDSSLSNAISRQKAVIYQDQVQIQPGTTRVPSNPVDPKLNVSDPHGRIQMQQLVQDPGYLLQQQFEQQPPPQQPQQQQQQQFIHGTHFIHHAPPGAVPISAYYPVYPSQQQSHPQVYYVPARQPPAYNMPVQQPNMAESASNIPSSRPQTPPNPTTLVPPSAAYNPMRNAPMPKTEMTAAAYRAVSAGTPQLVQVPTSQHQQQYTTLNLWHPQCLLSTRP 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02702 596 SMART PB1_new 12 103 IPR000270 GO:0005515
Adu09g02702 596 ProSiteProfiles PB1 domain profile. 1 103 IPR000270 GO:0005515
Adu09g02702 596 MobiDBLite consensus disorder prediction 299 382 - -
Adu09g02702 596 PANTHER OS05G0427100 PROTEIN-RELATED 1 584 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 161 183 - -
Adu09g02702 596 SUPERFAMILY CAD & PB1 domains 13 111 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 512 540 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 330 382 - -
Adu09g02702 596 PANTHER EXPRESSED PROTEIN 1 584 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 156 225 - -
Adu09g02702 596 Gene3D - 17 101 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 399 419 - -
Adu09g02702 596 CDD PB1_UP2 1 101 - -
Adu09g02702 596 MobiDBLite consensus disorder prediction 192 213 - -
Adu09g02702 596 Pfam PB1 domain 13 102 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02702 Adu-Chr9 114584496 114586635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02702 1 131 MAP Kinase Kinase Kinase AT3G46920 39.098 3.31e-24 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02702 09 114584496 114586635 Adu09g02702 09 114584496 114586635 ECH
Adu09g02702 09 114584496 114586635 Adu05g02700 05 94404227 94407127 ECH