Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02690 ATGAAGGACCGCCCTACGCTGTCCTCTTATGGCGCCATTTACGTTCCCCCGCACCACCGCCTCCGCTCCGTCATCACTTCCGCCAATTACAACTCCTCCGCTCCCTCTGTAGCCAAGCTCCGCGATCACCGTGGTGCAGCTCTAAACCCTAGACCCGTTGTTTCAGCTGCTCCTACCACTGTGCATCGCTCGCAAACGACGTTGCCGGAGCAAATTCCTGACAAGGGGAATTCGCGCTTTGTTTCAGCTTACGACGACGTGGTTTCCGAGGAAGGCTCCGATCGTGAATTCGAGGCTCCCTCATTTCGGAGTGCTTCACCAAATGATAATGTTGATGAGTGGAAGAGGAAGCTAACCTTGCTCTTAAACGACAAGAGTAAGCAAGAGTTGTTGTCCAGGGAGAAAAAGGATAGGCGTGATTTTGATCAAATTGCGCTTTTGGCAAGCAGAATGGGGCTGTATAGCCACATGTATGCAAAGGTTGTTGTCTTCAGTAAGGTTCCACTTCCAAACTATAGATATGACTTGGATGATAGGCGGCCGCAGAGGGAGGTGAGCATGCCTATAACTTTGTTAAGGCGAGTTGATGCATACTTTGAGGAACACCTTACCCGAAAGTCCAAGATGAAGGAAAGCTTTTCAGATGTATCATTTACAAGATCAAGCAGTAACAGTAGTATTGGTACAGATGAAGGGCTTTTTGAGCACCCTGAGCCACTTGCATCTAGTAAGGCTGTTGGGGAGAAAATACTTAGGCGGAGGAGCTTGCAAATGCATGATCAGCAGCAAGCATGGCAGGAATCTCCAGAAGGAAGAAGAATGCTAGAATTTCGCAGGAGTCTCCCTGCTTATAAAGAGAAAGAAGCAATATTGTCTCTCTTATCAAGAAATCAGGTAGTTGTCATCTCAGGCGAAACAGGTTGTGGCAAGACAACTCAAATTCCACAGTTTATTTTAGAATCTGAGATAGAATCAGTTCGAGGAGCTGCTTGTAATATCATATGCACACAACCAAGACGCATATCCGCTATGTCTGTTTCTGAAAGGGTTGCCTACGAGAGAGGGGAGAAATTGGGTGAATCTGTTGGATATAAAGTTCGATTGGAGGGTATGAAGGGGAGAGATACCCATCTTCTCTTTTGCACCACGGGCATCTTATTAAGAAGATTGCTAGCTGATAGAAACTTAACAGGTGTAACTCATGTTATCGTGGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTGCTTATCGTCCTTAAAGATCTCCTTCCGCACCGACCTGAAATGAAACTGATTTTGATGAGTGCTACCCTAGATTCAGAGCTCTTCTCTTCTTACTTTAATGGGGCACCAGTTATGAATATTCCGGGCTTCACATATCCCGTTAGAACTCATTTTTTGGAGGACATTCTTGAAATGACGGGCTACAGATTGACAACTTCTAATCAAATTGATGATTATGGTCAAGAAAGGATGTGGAAAATGAACAAACAGGTCCCAAGAAAGAGGAAAAGCCAAATTGCTTATGTTGTCGAGGATGCTATTAGAGCTGCTGATTTCAAAGATTACAGCCCACAGACACAGGAGTCTTTGTTGTGTTGGAATCCTGATTGTATTGGATTTAGTCTCATAGAATATATCCTATGCATGATATGTGAGAATGAAAGGCCTGGTGCTGTTTTAGTTTTTATGACTGGATGGGATGATATAAGCACTTTGAAAGAGAAGTTTTTGGCTCATCCTGTCTTAGGAGATCCAAATCGAGTTTTGTTGCTTACCTGTCATGGCTCAATGGGCAGTTCAGAACAGAGGTTAATATTTGAAGAACCCAAAGATGGAGTAAGAAAAATAGTGCTTGCAACAAATATCGCTGAAACGAGTATCACAATAAATGACGTTGTTTTTGTGCTTGACTGCGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACGCCCTGTTTGCTTCCAACATGGATCTCTAAGGTTTCTGCCCAACAGAGACGAGGAAGAGCTGGTCGTGTTCAACCTGGAGTGTGTTACCATATCTATCCTAGATGTGTATATGATGCATTTGCTGAGTATCAGTTGCCAGAAATTTTGAGGACACCCTTGCAATCTCTGTGTCTGCAAATAAAAAGTCTAAGACTTGGAAGCATACCTGAGTTCTTGTCTAGGGCTTTGCAGTCTCCGGAGATCCTTGCGGTACAAAATGCTATTGAGTATTTGAAAATAATTGGGGCTTTGGATGAGAATGAGAATTTGACTACTCTAGGGGCTATCTTCAATTGCCTGGATCCAATATTAACTGTGGCTGCTGGTCTTAGTGTGAGAGATCCTTTCCTAACACCACTGGACAAAAAAGACCTTGCAGAGGCAGCAAAATCTCAGTTTGCTGGAGCATATAGTGACCACCTTGCACTTATAAAGGCTTACGAGGGTTGGAAAGATGCAGAATTAGACATGGGAGGATGTGAATATTGCTGGAAAAATTTTCTTTCAGCACAATCAATGAAAGCTATTGATGCTCTTAGGAGAGAGTTCAGATGCCTGCTCAAGGATATTGGATTAGTTGATAGCAATACAGCCAACTGCAACTTGTGGAGCTGTGATGTGAATCTTATCCGGGCAGTTATTTGCTATGGTCTATATCCTGGAATTTGCGCTGTTGTGCACAATGAAAAGTCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCCGTCAATGCTCGGGAAACTAGAATTCCATATCCATGGTTACTTTTTAATGAGAAGATAAAAGTGAACTCTGTTTTCCTCCGCGACTCAACAGCTGTGCCTGATGCAGTGGTGCTTCTGTTTGGTGGAAACTTATTGAAAGGGGATGCTGATGGCCACCTAAAAATGTTGGGAGGATATCTGGAGTTCTTCATGGAACCTCCTGTTGCTGATCTGTACCAGTGTGTAAAGAGAGAACTTGATGACTTAATTCAAAGAAAACTACTTTTTCCAAAGATGAGCATACACTTGTATGATGAACTCCTATCAGCAGTGCGGTTGCTGATTTCCATAGACACATGTGAAGGCAAATTTGTATTTGGTCGTCGGGTCTTTAAACCAGCAAAGTCAACAGTGATGGCCACATCACATCCAGCATCGATTTCAAGGACTGAGAGTGGCCCTGGGGGTGATAATTCTAAAAGTCAGCTCCAGACCTTACTCACAAGAGCAGGATATGCTGCACCCAGCTACAAGACTAAACAATTGAAGAATAATCAGTTTCGGGCTACAGTTGAGTTCAATGGAATGCAGATAATGGGCCAACCCTGTAGCAATAAGAAAAGTGCAGAAAAAGATGCTGCAGCTGAGGCCTTGCAGTGGCTAATGGGTGGAAAACAGTCAGGCAGTGAGTATATCAGTCACATGTCCAAGTTGCTAAAGAAAAGTAAGAAGGATCACAGCTGA 3471 0.433 MKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAPSVAKLRDHRGAALNPRPVVSAAPTTVHRSQTTLPEQIPDKGNSRFVSAYDDVVSEEGSDREFEAPSFRSASPNDNVDEWKRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSDVSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRMLEFRRSLPAYKEKEAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVMNIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVEDAIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTLKEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTTLGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKSQFAGAYSDHLALIKAYEGWKDAELDMGGCEYCWKNFLSAQSMKAIDALRREFRCLLKDIGLVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNSVNARETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYLEFFMEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFGRRVFKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRATVEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHS 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02690 1156 Pfam Helicase conserved C-terminal domain 546 678 IPR001650 -
Adu09g02690 1156 Gene3D - 240 459 IPR027417 -
Adu09g02690 1156 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 291 458 IPR014001 -
Adu09g02690 1156 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 68 1078 - -
Adu09g02690 1156 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1067 1132 IPR014720 -
Adu09g02690 1156 MobiDBLite consensus disorder prediction 1051 1070 - -
Adu09g02690 1156 SMART ultradead3 278 472 IPR014001 -
Adu09g02690 1156 MobiDBLite consensus disorder prediction 214 230 - -
Adu09g02690 1156 CDD SF2_C_RHA 462 687 - -
Adu09g02690 1156 MobiDBLite consensus disorder prediction 214 235 - -
Adu09g02690 1156 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 878 959 IPR011709 -
Adu09g02690 1156 Gene3D - 1043 1135 - -
Adu09g02690 1156 Gene3D - 721 806 - -
Adu09g02690 1156 Gene3D - 543 698 IPR027417 -
Adu09g02690 1156 CDD DEXHc_RHA-like 297 457 - -
Adu09g02690 1156 SUPERFAMILY dsRNA-binding domain-like 1063 1140 - -
Adu09g02690 1156 SMART helicmild6 573 679 IPR001650 -
Adu09g02690 1156 Pfam Double-stranded RNA binding motif 1068 1130 IPR014720 -
Adu09g02690 1156 SMART DRBM_3 1068 1131 IPR014720 -
Adu09g02690 1156 Pfam DEAD/DEAH box helicase 288 442 IPR011545 GO:0003676|GO:0005524
Adu09g02690 1156 PANTHER ATP-DEPENDENT RNA HELICASE 68 1078 - -
Adu09g02690 1156 SMART ha2_5 741 812 IPR007502 GO:0004386
Adu09g02690 1156 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 545 719 IPR001650 -
Adu09g02690 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 828 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02690 Adu-Chr9 114377813 114386775 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02690 09 114377813 114386775 Adu09g02690 09 114377813 114386775 ECH