Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu08g02895 | ATGAAGATGGTAGATAACAAGGACCCTGCAATTACTCTCTTTGGGAAGAAGATTCCCTTTCCCGGTGAAGCTGCTCTCAATGCCGCGGAATTAGAGGATGATGAGGTGGACAAACAAGTAGGACACAAGGATGGTGGAGCTGATGAAGTTACTGAGAAAAAGAAAGAGGCTGATCCTTCTCGAAATGGAAATGCAGAGATCAATAAAAGAAAGGATTGGAGTGTTCAGAACCCAAAAACACCATCCATAGAGGAAGAAAGTGCAAAAATAAAGAAGGAGCAAAGCGATGCAGAGCAAGAGAAGGCAGTGAAGAAGCCGGATAAAGTGCTTCCATGTCCGCGCTGCAAAAGCATGGACACCAAGTTCTGCTACTACAACAACTACAACGTCAACCAGCCGCGCTACTTCTGCAAGGCGTGCCAAAGATACTGGACTGCAGGCGGCGCCATGAGGAACGTGCCAGTTGGGGCAGGCAGGAGAAAGAACAAGAACAGCGCCAGCGCCTCCCACTATCGCCACATCACCATCTCTGATGGGACCTTGAAATCCAGTGGCAGAGTCCTCAGCTTTGGATTGGATACACCACCACCACCCATATGTGATTCCATGGCGTCTGTCCTCAACGGTTTTCATGGAATTGAGGATCAAAGTGGAGAAAATGGCGATGACTGCTCGAGTGGATCTTCCATTACCATGGAGGAAACAGGAAAAACCGCATCCCAAGAGCCTTTAGCACAAAGCCCTCCCCAAGTCCCATGCATTCCTAGTGTTCCTTGGCCTTATCCCTGGAATTCTGCTCTGTGTCCTCCTGGATTTCCCATTTCATTCTACCCGGCTCCTTTTTGGAATTGGAATGTTCCGTGGTTCCCCTCACATCCATCTACTCTAGGGAAGCACTCCAGGGATGATGCTGATGATGACACGGTCAAGCAAGACTATAGGCAAAAGGAAGAACCTCCAAGGCAGAGAAATGGGTGTGTTTTGGTTCCCAAAACTTTAAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATCAAGAATGAATGTGTCATTGGGGGTGGAATGTTTAAGGCTTTCCAATCAAACAAGGAAGAGAAGAATAAAGTGGTTGAAACCTCGCCAGTGTTGCTGGCTAACCCTGCAGCCTTGTCTAGATCCCTTCATTTTCATGAGAACTCATGA | 1203 | 0.4746 | MKMVDNKDPAITLFGKKIPFPGEAALNAAELEDDEVDKQVGHKDGGADEVTEKKKEADPSRNGNAEINKRKDWSVQNPKTPSIEEESAKIKKEQSDAEQEKAVKKPDKVLPCPRCKSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGAMRNVPVGAGRRKNKNSASASHYRHITISDGTLKSSGRVLSFGLDTPPPPICDSMASVLNGFHGIEDQSGENGDDCSSGSSITMEETGKTASQEPLAQSPPQVPCIPSVPWPYPWNSALCPPGFPISFYPAPFWNWNVPWFPSHPSTLGKHSRDDADDDTVKQDYRQKEEPPRQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNECVIGGGMFKAFQSNKEEKNKVVETSPVLLANPAALSRSLHFHENS | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 295 | 322 | - | - | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 296 | 321 | - | - | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 69 | 83 | - | - | |
Adu08g02895 | 400 | Pfam | Dof domain, zinc finger | 107 | 164 | IPR003851 | GO:0003677|GO:0006355 | |
Adu08g02895 | 400 | ProSiteProfiles | Zinc finger Dof-type profile. | 110 | 164 | IPR003851 | GO:0003677|GO:0006355 | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 212 | 249 | - | - | |
Adu08g02895 | 400 | ProSitePatterns | Zinc finger Dof-type signature. | 112 | 148 | IPR003851 | GO:0003677|GO:0006355 | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 32 | 68 | - | - | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 32 | 106 | - | - | |
Adu08g02895 | 400 | Coils | Coil | 83 | 103 | - | - | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 219 | 247 | - | - | |
Adu08g02895 | 400 | MobiDBLite | consensus disorder prediction | 84 | 106 | - | - | |
Adu08g02895 | 400 | PANTHER | CYCLIC DOF FACTOR 2 | 3 | 399 | IPR045174 | GO:0003700|GO:0006355 | |
Adu08g02895 | 400 | PANTHER | CYCLIC DOF FACTOR 1 | 3 | 399 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu08g02895 | Adu-Chr8 | 45429036 | 45431290 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu08g02895 | 3 | 398 | C2C2-Dof Transcription Factor Family | AT3G47500 | 46.781 | 1.25e-112 | 335 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Adu08g02895 | zf-Dof | 2.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu08g02895 | - | - | aip:107629495 | 802.742 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g03269 | 01 | 105365477 | 105368717 | Adu08g02895 | 08 | 45429036 | 45431290 | ECH | |
Adu08g02895 | 08 | 45429036 | 45431290 | Adu08g02895 | 08 | 45429036 | 45431290 | ECH |