Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02733 ATGATGAATGAAGTAAGCCAACACATAAAGCCACCCCACAAACCAACTAAAACATTCTTTCTTTGCACTTTAATTTGGAGAGCATTTCCAGACAAACAAAGGGTTATGGAAGGGATAGGTCCCAACAACAATTCATGCACAACAAGGCCTCATAATGAAGGTGGTGGTGGAAATAACAACAACAATTTAGAGAAGAAAGCAAGACCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTTTGCTACTACAACAACTATAGCCTCACACAACCAAGGTATTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTTCCTGTTGGTGGAGGTTCAAGGAAGAACAAGATCAAGATCAATACCAATAACAACTCTTCGTCATCGTCGTCAACAACATCAACACCTTCATCAAATTCAAAGGTTCTTGTTCATCAAGACCTACTAAACCCTAATAATAATAGGGTTATTCAAGGACAAGATCTTAATCTTGCTTTCCCATCTATGGATCATCACAACAATTATCATCATGGTTTGTTACCATTTATTGATATGGCTAATAATAATAATAGTAGTAATAATAATAATAATAATAGTAATGGTGATGCACCAAGTTCTCTTTCAGCTTTGGAGCTTTTAAGGTCAAGCATGGCTTCTAGGGGTTTGAGTAATCCATATTATGCTTCTTCTAATTCTTCATTGGTACCATCAAATTCATCAAGTGTAATTTACCCTACTTCTGGATTAGGGTTTCCAACCATGCAAGAAGTAGTTAATAATAATAAGCAAAATAGTGGTAACCTTGGATTTTCATCTTCTTCATCAATTATGGATCATCAACATCATGAAGAGAATATTGTTAATAATAGTGATGGTGGAGGAAGAGTTCTTTTCCCTTTTGGAGAGGTGATGAAGAGTGCTGAAGAAAACAACAACAAAGAACAAGGGAATAATTCATCAAGCACTGCCAATGGTGGATATTGGAATGGAATGATGGGTCAAGGGTCATGGTGA 1041 0.367 MMNEVSQHIKPPHKPTKTFFLCTLIWRAFPDKQRVMEGIGPNNNSCTTRPHNEGGGGNNNNNLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKIKINTNNNSSSSSSTTSTPSSNSKVLVHQDLLNPNNNRVIQGQDLNLAFPSMDHHNNYHHGLLPFIDMANNNNSSNNNNNNSNGDAPSSLSALELLRSSMASRGLSNPYYASSNSSLVPSNSSSVIYPTSGLGFPTMQEVVNNNKQNSGNLGFSSSSSIMDHQHHEENIVNNSDGGGRVLFPFGEVMKSAEENNNKEQGNNSSSTANGGYWNGMMGQGSW 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02733 346 MobiDBLite consensus disorder prediction 318 338 - -
Adu08g02733 346 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 50 342 - -
Adu08g02733 346 MobiDBLite consensus disorder prediction 125 149 - -
Adu08g02733 346 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677|GO:0006355
Adu08g02733 346 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Adu08g02733 346 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Adu08g02733 346 MobiDBLite consensus disorder prediction 40 74 - -
Adu08g02733 346 MobiDBLite consensus disorder prediction 114 149 - -
Adu08g02733 346 MobiDBLite consensus disorder prediction 319 338 - -
Adu08g02733 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 342 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02733 Adu-Chr8 43782367 43784304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g02733 65 346 C2C2-Dof Transcription Factor Family AT3G61850 45.515 3.14e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu08g02733 zf-Dof 7.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02733 - - aip:107623806 525.013