Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01116 ATGCACCTAAGCCCTTACAAAAAAACACACTTCAATAACAACATTCCTCATCTTCATCATCATCATCATCATATCCATGATGATGATGCTTCACCCATAGACATGCATAACAACACCACCACCACCAACTCAACCAGCCTGTGTTCTTCCGATTCCGGTGAGCCATGTGAGGACGGTAAATGGGCTTGCAAGCTCCTCAAGGAGTGTGCCATCGCCATCTCACAAAGAGACTCCACCAAAATCCACCACCTTCTATGGATGCTCAACGAACTCGCTTCCCCTTACGGCGACTTGGATCAGAAGCTCGCCTCTTACTTCTTGCAAGCCTTGTTCTGCAAGGCCACGGAATCCGGCCACCGTTGCTACAAGACTCTCTCAACCGTCGCTCAAAAGAGCAACAACTTCGACTCCGCCAGAAAATTGATACTCAAATTCCAAGAAGTCTCCCCTTGGACAACCTTCGGACACGTGGCAGCCAACGGAGCAATACTCGAGGCCTTGGAAGGCGAGTCCAACCTCCATATAATTGACATAAGCAACACTCTTTGCACCCAGTGGCCAACGCTGTTCGAAGCGCTGGCCACTAGAAAAGACGAAACTCCTCGTCTCAGACTTACCGTGGTGGCGCTCAGCTCCGCCACAGTAAGTTCTGTTATGAAGGAGGTCGGACAGAGAATGGAGAAGTTCGCGAGACTCATGGGAGTTCCCTTTGAATTCAACGTAATCAATGGTCTCGATCGCCTGGGAGAGCTCACGAAGGAATCGTTAGGGATTACAAACGACGAAGCCATCGCCGTGAATTGCATCGGAGCGTTGAGGAGGATCGAGGTTGAAGAAAGAGAATCGGCAATTCGCATGTTCAGATCGCTTAATCCAAAAGTGGTAACCGTCGTTGAGGAAGAAGCCGATTTCAGCAGCAATCGAAACGATTTCGTTCAGTGCTTTGAAGAGTGCCTTAAATTCTACGGCTTATACTTCGAGATGTTGGAAGAGAGTTTTCCATTAACGAGCAACGAAAGGTTGATGTTAGAGAGAGATTGTTCTCGAAGCATAGTTAGGGTTTTGGCTTGTGGCGGTGGTGATGAACAAAACAATAATAAAGAAGAGTTTGAAGATTGTTGTGAGAGAAGAGAGAGAGGGAGACAGTGGTGTGAGAAGCTGAAGAAGGAGTTTTCAGGCGCAAAGTTCAGCGATGATGTGGTTGACGATGTTAAAGCATTGCTCAAGAGATACCGTGGAGGTTGGTCACTGGTTTTGCCACAACAACAACAACAAGAAGAAGGACATAATAGTAATTACAATAATAATACTCTCTCAGGAATTTTCTTGACATGGAAGGAGGAACCTGTAGTTTGGGCATCAGCATGGAAACCCTAG 1377 0.4699 MHLSPYKKTHFNNNIPHLHHHHHHIHDDDASPIDMHNNTTTTNSTSLCSSDSGEPCEDGKWACKLLKECAIAISQRDSTKIHHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGHRCYKTLSTVAQKSNNFDSARKLILKFQEVSPWTTFGHVAANGAILEALEGESNLHIIDISNTLCTQWPTLFEALATRKDETPRLRLTVVALSSATVSSVMKEVGQRMEKFARLMGVPFEFNVINGLDRLGELTKESLGITNDEAIAVNCIGALRRIEVEERESAIRMFRSLNPKVVTVVEEEADFSSNRNDFVQCFEECLKFYGLYFEMLEESFPLTSNERLMLERDCSRSIVRVLACGGGDEQNNNKEEFEDCCERRERGRQWCEKLKKEFSGAKFSDDVVDDVKALLKRYRGGWSLVLPQQQQQEEGHNSNYNNNTLSGIFLTWKEEPVVWASAWKP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01116 458 PANTHER PROTEIN SHORT-ROOT-LIKE 34 457 - -
Adu08g01116 458 ProSiteProfiles GRAS family profile. 53 457 IPR005202 -
Adu08g01116 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 457 IPR005202 -
Adu08g01116 458 Pfam GRAS domain family 64 457 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01116 Adu-Chr8 20015332 20016784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01116 58 458 GRAS Transcription Factor Family AT4G37650 50.239 3.81e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu08g01116 GRAS 3.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g01116 - - ahf:112773020 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00798 09 11678946 11680904 Adu08g01116 08 20015332 20016784 PCT