Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01021 ATGGCTCCCTACCATCTCCAAGACGCTCTATACTGCTCAGAGGAAGAGGATGAATTAGAACAAGATGAGGGTTCCGGGTTGGTAGAAGGGGACATGTTTTGGGATGATGAGGAGCTTGCGTGGATGCTGGCCAGGGAAGAACAACACACAACACACACCCCTCTCTGCTTCCAATTGGAGTCTGCTCGCAGAGAGGCGGTGGAGTGGATACTCAAAGTCAGCTCACATTACTCCTTCTCTCCTCTCACTTCTCTTCTTGCCGCCAACTACCTTCACAGGTTCCTCTTCACTTTCTCCTCCATTAACAATCTCAATAAGCCATGGATGACTCAGCTGGCTGCCGTCGCTTCTCTCTCACTCGCTGCCAAGCTTGAAGAGACTCATCTCCCCCACTTACTAGACCTCCAAGTGGAGGATTGCAGATACGTGTTCGAAGCCAAAACCATCAAAAGGATGGAGATTTTGGTGCTTTCAACTCTCCGATGGAAGATGAATCCCGTCACTCCTCTCTCTTTTCTCGACTATATCACACGAAGACTTGGATTATTCAACTCCAACGACTTCCTCACCAGATCCCAATCCCTTCTTCTATCTACCCTTCCAGATAGCAGGTTCATGAGTTACCTTCCTTCTGTGGTGGCAACTGCCACAATGATGCACGTGTTGAATGGCGTGGAGCAGCGAAACCAGGTGGTACGCATTCTCGGAACGAAGAAAGAGAAGGTGGATGAATGCTTGAAGCTGATATGGGAACAGGGGAACAAGAAACGCAAGTTTGGATGGGTTCCAGATAGTCCAAACGGCGTCATGGATGTGTCGTTTACCTCTGCCTCTGATGATAGCTCCAATGATTCATGGCCTCTACTACTTGCTAATAATAATAATAATAACAACAATGTTTCTTCCCTCTCATCCTCACCGGAACCTAAGAAGAATAGGACTCTACTAAACCCTCCCAACTCATCCCATTTCATTTAG 978 0.4765 MAPYHLQDALYCSEEEDELEQDEGSGLVEGDMFWDDEELAWMLAREEQHTTHTPLCFQLESARREAVEWILKVSSHYSFSPLTSLLAANYLHRFLFTFSSINNLNKPWMTQLAAVASLSLAAKLEETHLPHLLDLQVEDCRYVFEAKTIKRMEILVLSTLRWKMNPVTPLSFLDYITRRLGLFNSNDFLTRSQSLLLSTLPDSRFMSYLPSVVATATMMHVLNGVEQRNQVVRILGTKKEKVDECLKLIWEQGNKKRKFGWVPDSPNGVMDVSFTSASDDSSNDSWPLLLANNNNNNNNVSSLSSSPEPKKNRTLLNPPNSSHFI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01021 325 PANTHER CYCLINS 15 308 IPR039361 -
Adu08g01021 325 SUPERFAMILY Cyclin-like 33 165 IPR036915 -
Adu08g01021 325 Pfam Cyclin, C-terminal domain 167 253 IPR004367 -
Adu08g01021 325 CDD CYCLIN 63 95 IPR013763 -
Adu08g01021 325 Gene3D - 42 247 - -
Adu08g01021 325 Pfam Cyclin, N-terminal domain 48 165 IPR006671 -
Adu08g01021 325 PANTHER CYCLIN D3.1 PROTEIN 15 308 - -
Adu08g01021 325 SMART cyclin_7 68 158 IPR013763 -
Adu08g01021 325 SMART cyclin_7 171 251 IPR013763 -
Adu08g01021 325 Gene3D - 52 165 - -
Adu08g01021 325 SUPERFAMILY Cyclin-like 150 252 IPR036915 -
Adu08g01021 325 SMART Cyclin_C_2 167 278 IPR004367 -
Adu08g01021 325 MobiDBLite consensus disorder prediction 285 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01021 Adu-Chr8 18365159 18366693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01021 2 314 Core Cell Cycle Gene Families AT5G67260 44.034 2.57e-76 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01021 08 18365159 18366693 Adu05g00636 05 7195143 7197012 ECH
Adu08g01021 08 18365159 18366693 Adu01g01024 01 15536340 15538536 ECH
Adu08g01021 08 18365159 18366693 Adu09g02648 09 113998260 114000183 ECH
Adu08g01021 08 18365159 18366693 Adu08g01021 08 18365159 18366693 ECH
Adu06g03152 06 109741558 109743846 Adu08g01021 08 18365159 18366693 PCT