Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g01020 ATGGGAGGTTGGGCAATAGCTGTGCATGGTGGCGCTGGCGTGGACCCAAATCTCCCACCTCAACGCCAGGAAGAGGCCAAGCAACTCCTTGCTCGTTGCCTCAACCTTGGCATCTCTTCTCTTCATTCCAATGCTTCCGCCATCGACGTCGTTGAACTTGTCGTGAGGGAGCTGGAAACGGATCCACTGTTCAACTCTGGGCGCGGATCTGCGCTGACAGAAAACGGTACAGTGGAAATGGAGGCAAGCATCATGGACGGTCCCAAGAGACGTTGCGGCGCCGTTTCTGGCCTCACAACCGTCAAGAACCCTATCTCTCTTGCTCGCCTTGTCATGGATAAGTCCCCCCATTCCTACCTTGCCTTCTCCGGCGCTGAAGATTTCGCCAGGCTCCAGGGTGTGGAGGTTGTGGAGAACGAATACTTCATTACCCCTGAGAATGTTGGGATGCTGAAGCTCGCAAAGGAAGCCAATACAATCCTGTTCGACTACAGGATTCCAACGAACGGTTACGACACGTGCGGCGCAGGAGTGGAGAGCCCAATGAAGATGAACGGGCTTCCGATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAAGGAAGGTAGATGTGCGGCTGCCACGTCGACAGGGGGGCTCATGAACAAGATGACTGGTAGGATCGGTGACTCACCGCTCATAGGAGCTGGAACTTACGCGTGTGAGTTGTGCGGTGTGTCCTGCACGGGTGAAGGGGAGGCTATCATACGCGGGACTCTGGCGCGTGAGGTTGCGGCCGTTATGGAATACAAGGGCCTGGGCCTTCAGGAAGCGGTGGACTTTGTGATCAAGAATAGGCTCGACGAAGGGTTCGCTGGGCTCATAGCGGTGTCTAATAAGGGTGAGGTGGCTTATGGGTTCAACTGCAATGGCATGTTTAGGGGCTGCGCCACTGAGGATGGCTTCATGGAAGTGGGAATCTGGGAATAG 981 0.5607 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLARCLNLGISSLHSNASAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARLQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTNGYDTCGAGVESPMKMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKNRLDEGFAGLIAVSNKGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g01020 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Adu08g01020 326 CDD Asparaginase_2 5 318 - -
Adu08g01020 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Adu08g01020 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Adu08g01020 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Adu08g01020 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g01020 Adu-Chr8 18333921 18335551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g01020 6 286 Miscellaneous Gene Families AT4G00590 27.723 5.78e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01020 08 18333921 18335551 Adu08g01020 08 18333921 18335551 ECH
Adu06g03151 06 109708736 109711097 Adu08g01020 08 18333921 18335551 PCT